Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
B4F6X2
(LYR motif-containing protein 9) with a FATCAT P-Value: 0.0 and RMSD of 0.35 angstrom. The sequence alignment identity is 75.6%.
Structural alignment shown in left. Query protein A8MSI8 colored as red in alignment, homolog B4F6X2 colored as blue.
Query protein A8MSI8 is also shown in right top, homolog B4F6X2 showed in right bottom. They are colored based on secondary structures.
A8MSI8 MAPLPGAELVRRPLQLYRYLLRCCQQLPTKGIQQHYKHAVRQSFRVHSDEDNPERIQQIIKRAIEDADWIMNKYKKQN 78 B4F6X2 MPPLPGAELVHNPLQLYRYLLRCCKLLPTESLQHYYRHSVKQSFRVHADEDDPERIQQIIKRAIEDADWVLNKYKKES 78
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0005737 | cytoplasm |
2. P | GO:0034553 | mitochondrial respiratory chain complex II assembly |
2. P | GO:0043035 | chromatin insulator sequence binding |
2. P | GO:1990221 | L-cysteine desulfurase complex |
2. P | GO:0071819 | DUBm complex |
2. P | GO:0030374 | nuclear receptor coactivator activity |
2. P | GO:0022904 | respiratory electron transport chain |
2. P | GO:0005747 | mitochondrial respiratory chain complex I |
2. P | GO:0015976 | carbon utilization |
2. P | GO:0010460 | positive regulation of heart rate |
2. P | GO:0005762 | mitochondrial large ribosomal subunit |
2. P | GO:0005643 | nuclear pore |
2. P | GO:0006368 | transcription elongation from RNA polymerase II promoter |
2. P | GO:0016578 | histone deubiquitination |
2. P | GO:0009631 | cold acclimation |
2. P | GO:0033615 | mitochondrial proton-transporting ATP synthase complex assembly |
2. P | GO:0006094 | gluconeogenesis |
2. P | GO:0031966 | mitochondrial membrane |
2. P | GO:0006406 | mRNA export from nucleus |
2. P | GO:0005758 | mitochondrial intermembrane space |
2. P | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone |
2. P | GO:0050881 | musculoskeletal movement |
2. P | GO:0003713 | transcription coactivator activity |
2. P | GO:0006111 | regulation of gluconeogenesis |
2. P | GO:0070131 | positive regulation of mitochondrial translation |
2. P | GO:0050995 | negative regulation of lipid catabolic process |
2. P | GO:0030437 | ascospore formation |
2. P | GO:0000124 | SAGA complex |
2. P | GO:0061469 | regulation of type B pancreatic cell proliferation |
2. P | GO:0045777 | positive regulation of blood pressure |
2. P | GO:0008137 | NADH dehydrogenase (ubiquinone) activity |
2. P | GO:0045271 | respiratory chain complex I |
2. P | GO:0005759 | mitochondrial matrix |
2. P | GO:0005739 | mitochondrion |
2. P | GO:0015031 | protein transport |
2. P | GO:0001094 | TFIID-class transcription factor complex binding |
2. P | GO:0032543 | mitochondrial translation |
2. P | GO:0031936 | obsolete negative regulation of chromatin silencing |
2. P | GO:0032307 | negative regulation of prostaglandin secretion |
2. P | GO:0006979 | response to oxidative stress |
2. P | GO:0055093 | response to hyperoxia |
2. P | GO:0016604 | nuclear body |
2. P | GO:0044183 | protein folding chaperone |
2. P | GO:0045944 | positive regulation of transcription by RNA polymerase II |
2. P | GO:1900139 | negative regulation of arachidonic acid secretion |
2. P | GO:0014850 | response to muscle activity |
2. P | GO:0006312 | mitotic recombination |
2. P | GO:0042776 | mitochondrial ATP synthesis coupled proton transport |
2. P | GO:0034551 | mitochondrial respiratory chain complex III assembly |
2. P | GO:0070390 | transcription export complex 2 |
2. P | GO:0070742 | C2H2 zinc finger domain binding |
2. P | GO:0016226 | iron-sulfur cluster assembly |
2. P | GO:0032981 | mitochondrial respiratory chain complex I assembly |
2. P | GO:0006105 | succinate metabolic process |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | B6NK32 | LYR motif-containing protein 9 | 0.00e+00 | 3.43e-40 | 2.45e-24 |
1. PB | B5XFA7 | LYR motif-containing protein 2 | 3.01e-13 | 1.80e-30 | 0.049 |
1. PB | Q3UN90 | LYR motif-containing protein 9 | 0.00e+00 | 7.41e-70 | 3.93e-49 |
1. PB | A5D7J1 | LYR motif-containing protein 9 | 0.00e+00 | 3.36e-86 | 1.11e-50 |
1. PB | A8MSI8 | LYR motif-containing protein 9 | 0 | 4.31e-129 | 8.41e-54 |
1. PB | B3DFV0 | LYR motif-containing protein 9 | 0.00e+00 | 3.21e-66 | 1.62e-35 |
1. PB | A9SNJ1 | LYR motif-containing protein PHYPADRAFT_186863 | 7.79e-10 | 1.97e-17 | 0.008 |
1. PB | B4F6X2 | LYR motif-containing protein 9 | 0.00e+00 | 5.08e-74 | 4.60e-42 |
1. PB | B2RZD7 | LYR motif-containing protein 9 | 0.00e+00 | 5.21e-82 | 1.05e-48 |
2. P | P42114 | NADH-ubiquinone oxidoreductase 14.8 kDa subunit | 7.70e-06 | 2.56e-10 | NA |
2. P | Q4R5J1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 5.26e-05 | 5.20e-11 | NA |
2. P | B3DLF3 | LYR motif-containing protein 2 | 1.47e-11 | 1.20e-33 | NA |
2. P | B5XCZ6 | Electron transfer flavoprotein regulatory factor 1 | 6.25e-09 | 1.53e-11 | NA |
2. P | Q0MQA2 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 4.90e-05 | 9.12e-11 | NA |
2. P | Q753Y5 | Increased recombination centers protein 19 | 4.12e-03 | 1.10e-02 | NA |
2. P | Q8K215 | LYR motif-containing protein 4 | 2.47e-10 | 3.34e-13 | NA |
2. P | Q9CR13 | Protein FMC1 homolog | 4.02e-05 | 2.34e-04 | NA |
2. P | Q0MQA3 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 1.05e-05 | 7.60e-14 | NA |
2. P | Q9US02 | Succinate dehydrogenase assembly factor 1, mitochondrial | 6.51e-10 | 1.29e-21 | NA |
2. P | Q559Z4 | Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 5.74e-05 | 7.51e-09 | NA |
2. P | Q54PT6 | Electron transfer flavoprotein regulatory factor 1 homolog | 1.47e-06 | 1.71e-04 | NA |
2. P | B4JLC3 | Enhancer of yellow 2 transcription factor | 2.17e-02 | 4.93e-03 | NA |
2. P | Q54T58 | LYR motif-containing protein 1 | 1.57e-08 | 5.82e-05 | NA |
2. P | Q6BIY6 | Succinate dehydrogenase assembly factor 3, mitochondrial | 1.87e-06 | 2.88e-10 | NA |
2. P | B4L1Z8 | Enhancer of yellow 2 transcription factor | 9.23e-04 | 1.70e-02 | NA |
2. P | B5XD90 | LYR motif-containing protein 4B | 4.29e-11 | 1.81e-15 | NA |
2. P | Q4QQY2 | Complex III assembly factor LYRM7 | 4.45e-07 | 1.80e-02 | NA |
2. P | Q54FN9 | LYR motif-containing protein 4 | 2.44e-10 | 2.31e-20 | NA |
2. P | B4PY93 | Enhancer of yellow 2 transcription factor | 2.23e-03 | 3.99e-02 | NA |
2. P | B8NCF0 | Mitochondrial zinc maintenance protein 1, mitochondrial | 1.12e-06 | 2.96e-02 | NA |
2. P | P58503 | 30S ribosomal protein S17e | 2.67e-03 | 1.88e-02 | NA |
2. P | Q8SZ16 | Succinate dehydrogenase assembly factor 3, mitochondrial | 1.90e-06 | 1.37e-07 | NA |
2. P | Q6DCS1 | LYR motif-containing protein 4 | 1.09e-10 | 1.20e-14 | NA |
2. P | Q9CQZ5 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 1.09e-05 | 1.07e-09 | NA |
2. P | B4M6M6 | Enhancer of yellow 2 transcription factor | 4.25e-03 | 6.46e-03 | NA |
2. P | P0CC00 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 4.14e-05 | 1.17e-10 | NA |
2. P | Q3E785 | Succinate dehydrogenase assembly factor 1, mitochondrial | 7.90e-07 | 2.38e-27 | NA |
2. P | Q32LM5 | LYR motif-containing protein 2 | 5.50e-12 | 4.25e-33 | NA |
2. P | Q0MQA1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 4.94e-05 | 9.12e-11 | NA |
2. P | Q63362 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 4.09e-05 | 2.07e-11 | NA |
2. P | O60068 | Protein isd11 | 1.58e-07 | 1.18e-04 | NA |
2. P | L0R8F8 | MIEF1 upstream open reading frame protein | 5.86e-07 | 1.65e-34 | NA |
2. P | Q96HJ9 | Protein FMC1 homolog | 3.46e-05 | 4.59e-04 | NA |
2. P | Q8U0U1 | 30S ribosomal protein S17e | 2.58e-03 | 4.84e-02 | NA |
2. P | P82116 | Protein bcn92 | 3.11e-10 | 2.20e-13 | NA |
2. P | Q9CZ83 | 39S ribosomal protein L55, mitochondrial | 1.36e-01 | 2.07e-02 | NA |
2. P | A6ZYX9 | Succinate dehydrogenase assembly factor 1, mitochondrial | 8.01e-07 | 2.38e-27 | NA |
2. P | Q1XDB1 | Putative DNA-directed RNA polymerase subunit omega | 6.47e-05 | 3.59e-02 | NA |
2. P | B5FXA0 | Electron transfer flavoprotein regulatory factor 1 | 3.62e-09 | 2.36e-09 | NA |
2. P | Q9HD34 | LYR motif-containing protein 4 | 2.34e-10 | 3.04e-12 | NA |
2. P | P62506 | 54S ribosomal protein L44, mitochondrial | 1.57e-02 | 1.61e-05 | NA |
2. P | Q59L89 | Succinate dehydrogenase assembly factor 3, mitochondrial | 2.23e-06 | 1.40e-10 | NA |
2. P | Q1G3M2 | LYR motif-containing protein At3g19508 | 5.54e-07 | 4.13e-07 | NA |
2. P | B0WG73 | Enhancer of yellow 2 transcription factor | 2.41e-03 | 1.00e-04 | NA |
2. P | Q6CUY0 | Succinate dehydrogenase assembly factor 3, mitochondrial | 2.41e-06 | 7.75e-10 | NA |
2. P | Q54HG5 | Succinate dehydrogenase assembly factor 1A, mitochondrial | 1.21e-05 | 1.14e-23 | NA |
2. P | Q9LHI0 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 1.64e-05 | 1.60e-11 | NA |
2. P | B8JLQ0 | LYR motif-containing protein 4 | 9.94e-09 | 6.67e-16 | NA |
2. P | B6GWX1 | Mitochondrial zinc maintenance protein 1, mitochondrial | 1.78e-05 | 1.07e-03 | NA |
2. P | Q3SZA2 | Protein FMC1 homolog | 3.06e-05 | 2.49e-04 | NA |
2. P | Q4IN52 | Succinate dehydrogenase assembly factor 3, mitochondrial | 2.33e-06 | 1.92e-08 | NA |
2. P | Q54F42 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 1.46e-05 | 1.69e-13 | NA |
2. P | A9UMQ3 | LYR motif-containing protein 1 | 1.04e-05 | 7.28e-03 | NA |
2. P | Q29IN4 | Enhancer of yellow 2 transcription factor | 1.82e-03 | 2.70e-03 | NA |
2. P | Q751X1 | Succinate dehydrogenase assembly factor 3, mitochondrial | 3.93e-06 | 6.81e-06 | NA |
2. P | A3KNJ8 | LYR motif-containing protein 5B | 5.88e-08 | 4.42e-11 | NA |
2. P | B5FZA8 | LYR motif-containing protein 4 | 1.46e-10 | 1.50e-16 | NA |
2. P | Q16718 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 5.19e-05 | 9.12e-11 | NA |
2. P | Q6IPR1 | Electron transfer flavoprotein regulatory factor 1 | 5.93e-09 | 1.62e-13 | NA |
2. P | B5X5U9 | LYR motif-containing protein 4A | 2.19e-10 | 1.64e-14 | NA |
2. P | A7S1A4 | Protein FMC1 homolog | 4.20e-05 | 6.24e-06 | NA |
2. P | Q18359 | Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 1.40e-04 | 9.36e-06 | NA |
2. P | Q9NU23 | LYR motif-containing protein 2 | 1.48e-11 | 1.04e-35 | NA |
2. P | O46098 | Protein bcn92 | 3.89e-10 | 5.51e-13 | NA |
2. P | Q39084 | Late embryogenis abundant protein 41 | 3.32e-01 | 1.84e-02 | NA |
2. P | Q2U0V4 | Mitochondrial zinc maintenance protein 1, mitochondrial | 1.34e-06 | 9.69e-03 | NA |
2. P | Q5RES3 | LYR motif-containing protein 2 | 1.55e-11 | 5.08e-36 | NA |
2. P | Q91V16 | Electron transfer flavoprotein regulatory factor 1 | 4.04e-09 | 4.29e-14 | NA |
2. P | Q55BM0 | Succinate dehydrogenase assembly factor 1B, mitochondrial | 2.86e-10 | 4.34e-05 | NA |
2. P | Q5BBH7 | Succinate dehydrogenase assembly factor 3, mitochondrial | 4.43e-06 | 1.04e-07 | NA |
2. P | Q5RIM0 | LYR motif-containing protein 2 | 1.71e-11 | 2.56e-38 | NA |
2. P | Q17MZ8 | Enhancer of yellow 2 transcription factor | 6.59e-03 | 9.25e-04 | NA |
2. P | G2TRM0 | ATP synthase assembly factor fmc1, mitochondrial | 4.63e-05 | 2.32e-05 | NA |
2. P | P62507 | 54S ribosomal protein L44, mitochondrial | 3.39e-02 | 7.28e-03 | NA |
2. P | Q6FMR7 | Succinate dehydrogenase assembly factor 3, mitochondrial | 4.94e-06 | 2.61e-05 | NA |
2. P | Q0MQA4 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 8.31e-06 | 2.04e-13 | NA |
2. P | P0CM00 | Succinate dehydrogenase assembly factor 3, mitochondrial | 2.40e-06 | 1.20e-03 | NA |
2. P | Q7Z7F7 | 39S ribosomal protein L55, mitochondrial | 7.20e-02 | 4.66e-03 | NA |
2. P | Q945M1 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | 4.34e-06 | 2.64e-05 | NA |
2. P | Q4G012 | Protein FMC1 homolog | 2.84e-05 | 1.43e-03 | NA |
2. P | P0CM01 | Succinate dehydrogenase assembly factor 3, mitochondrial | 2.62e-06 | 1.20e-03 | NA |
2. P | A9UL63 | Protein FMC1 homolog | 2.30e-05 | 5.17e-04 | NA |
2. P | P23935 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 4.08e-05 | 1.00e-09 | NA |
2. P | Q0MQA5 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 1.04e-05 | 2.04e-13 | NA |
2. P | A0JPA6 | Complex III assembly factor LYRM7 | 4.54e-07 | 2.21e-02 | NA |
2. P | Q4WHK3 | Succinate dehydrogenase assembly factor 3, mitochondrial | 3.75e-06 | 3.36e-12 | NA |
2. P | Q8MNU8 | Protein FMC1 homolog | 5.45e-06 | 4.48e-07 | NA |
2. P | Q4PCI7 | Succinate dehydrogenase assembly factor 3, mitochondrial | 6.47e-07 | 1.00e-02 | NA |
2. P | Q9P7Y2 | Succinate dehydrogenase assembly factor 3, mitochondrial | 1.40e-06 | 1.99e-11 | NA |
2. P | Q02366 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 1.02e-05 | 2.07e-13 | NA |
2. P | A7S1H9 | Succinate dehydrogenase assembly factor 3, mitochondrial | 4.46e-07 | 3.62e-02 | NA |
2. P | Q9VE04 | 39S ribosomal protein L55, mitochondrial | 6.53e-01 | 3.14e-03 | NA |
2. P | P56556 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 | 8.22e-06 | 2.04e-13 | NA |
2. P | Q04401 | Succinate dehydrogenase assembly factor 3, mitochondrial | 5.37e-06 | 1.35e-04 | NA |
2. P | Q7SF55 | Succinate dehydrogenase assembly factor 3, mitochondrial | 6.89e-06 | 3.50e-04 | NA |
2. P | Q0VCR0 | Electron transfer flavoprotein regulatory factor 1 | 1.87e-07 | 1.53e-12 | NA |
2. P | Q9CPP6 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 4.14e-05 | 2.01e-11 | NA |
2. P | Q503U1 | LYR motif-containing protein 5A | 3.03e-09 | 9.00e-15 | NA |
2. P | Q0VCG0 | LYR motif-containing protein 4 | 2.11e-10 | 4.73e-10 | NA |
2. P | B4F7A1 | Complex III assembly factor LYRM7 | 5.26e-07 | 4.32e-02 | NA |
2. P | P0CB99 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 | 4.86e-05 | 2.22e-09 | NA |
2. P | Q6Q560 | Protein ISD11 | 8.11e-10 | 1.96e-21 | NA |
2. P | Q5AX36 | Mitochondrial zinc maintenance protein 1, mitochondrial | 2.03e-06 | 3.72e-02 | NA |
2. P | P51376 | Putative DNA-directed RNA polymerase subunit omega | 4.67e-05 | 1.08e-03 | NA |
2. P | Q8R033 | LYR motif-containing protein 2 | 2.40e-11 | 1.17e-37 | NA |
2. P | Q5PQ90 | LYR motif-containing protein 2 | 2.57e-11 | 7.03e-33 | NA |
2. P | B2GV91 | LYR motif-containing protein 2 | 2.78e-11 | 2.13e-35 | NA |
2. P | Q54NR3 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | 2.17e-06 | 4.92e-02 | NA |
2. P | A1C9A5 | Mitochondrial zinc maintenance protein 1, mitochondrial | 1.54e-05 | 4.67e-02 | NA |
2. P | P0C146 | Succinate dehydrogenase assembly factor 3, mitochondrial | 9.89e-06 | 2.33e-07 | NA |
2. P | P21571 | ATP synthase-coupling factor 6, mitochondrial | 1.40e-02 | 6.40e-03 | NA |