Summary

C9J6K1

Homolog: Q9UN81.
Function: LINE-1 retrotransposable element ORF1 protein.

Statistics

Total GO Annotation: 9
Unique PROST Go: 9
Unique BLAST Go: 0

Total Homologs: 6
Unique PROST Homologs: 4
Unique BLAST Homologs: 0

Structures and Sequence Alignment

The best structural homolog that predicted by 2. P was Q9UN81 (LINE-1 retrotransposable element ORF1 protein) with a FATCAT P-Value: 0.00766 and RMSD of 2.84 angstrom. The sequence alignment identity is 15.5%.
Structural alignment shown in left. Query protein C9J6K1 colored as red in alignment, homolog Q9UN81 colored as blue. Query protein C9J6K1 is also shown in right top, homolog Q9UN81 showed in right bottom. They are colored based on secondary structures. 

  C9J6K1 ---------------------------------------------------------------------------------------------------- 0
  Q9UN81 MGKKQNRKTGNSKTQSASPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSELREDIQTKGKEVENFEKNLEECITRITNTEKCLKELMELKTKAREL 100

  C9J6K1 --------------------MQPEVEPVCFPAM---GS---PTMHRKAGAL--LMD-LETPEEMQARSLGRP---IKS-SK--QYLRQVIAE-YEALDR- 63
  Q9UN81 REECRSLRSRCDQLEERVSAMEDEMN-----EMKREGKFREKRIKRNEQSLQEIWDYVKRP---NLRLIGVPESDVENGTKLENTLQDIIQENFPNLARQ 192

  C9J6K1 ---ELPCIRKFPTPP--ASQPLCLCMETLPEE---DFTHLEVLQALEAQLPGAMESGRVS----SIRFENMNVICGTAGRRNRW-----LIAVTDFQTR- 145
  Q9UN81 ANVQIQEIQR--TPQRYSSR-----RAT-PRHIIVRFTKVE-MK--EKMLRAAREKGRVTLKGKPIRL-TADLSAETLQARREWGPIFNILKEKNFQPRI 280

  C9J6K1 ---SRLLRSGLSPRG-LAHQIVRHDDLLLGDYRLHLRRSLVRRRML-EALGAEPNEEA--------- 198
  Q9UN81 SYPAKL--SFIS-EGEIKYFI---DKQMLRDF-VTTRPAL--KELLKEALNMERNNRYQPLQNHAKM 338

Go Annotations

1. PB indicates the go terms that are found by both PROST and BLAST.
2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source GO Description
2. P GO:0042025 host cell nucleus
2. P GO:1990904 ribonucleoprotein complex
2. P GO:0000166 nucleotide binding
2. P GO:0010494 cytoplasmic stress granule
2. P GO:0036464 cytoplasmic ribonucleoprotein granule
2. P GO:0003727 single-stranded RNA binding
2. P GO:0005730 nucleolus
2. P GO:0003697 single-stranded DNA binding
2. P GO:0032197 transposition, RNA-mediated

Homologs

1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.

Source Homolog Description FATCAT p-val PROST Evalue BLAST Evalue
1. PB D3Z070 Putative uncharacterized protein C19orf81 homolog 7.23e-11 1.70e-37 2.04e-111
1. PB C9J6K1 Putative uncharacterized protein C19orf81 0 5.84e-127 1.08e-144
2. P Q9UN81 LINE-1 retrotransposable element ORF1 protein 7.66e-03 9.78e-05 NA
2. P P28279 Nuclear phosphoprotein UL3 NA 6.52e-04 NA
2. P P0C012 Nuclear phosphoprotein UL3 NA 6.52e-04 NA
2. P P11260 LINE-1 retrotransposable element ORF1 protein 4.57e-02 1.71e-02 NA