Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
A2AJB2
(Transmembrane protein 141) with a FATCAT P-Value: 3.29e-07 and RMSD of 1.95 angstrom. The sequence alignment identity is 22.0%.
Structural alignment shown in left. Query protein L0R6Q1 colored as red in alignment, homolog A2AJB2 colored as blue.
Query protein L0R6Q1 is also shown in right top, homolog A2AJB2 showed in right bottom. They are colored based on secondary structures.
L0R6Q1 MADDKDSLPKLKDLAFLKNQLESLQRRVEDEV---NSGVGQDGSLLSSPFLKG---FLAG---------YVVAKLRASAVLGFAVGTCTGIYAAQAYAVP 85 A2AJB2 ----------------MVN-L-GL-SRVDDAVAARHPGLEEFAACQSHAFMKGVFTFVTGTGATFGLLMFIKRKFPYPVQWSFLVSAIAGSVA--SYRVT 79 L0R6Q1 NVE--K--TLRDYLQLLRKG--P-D------- 103 A2AJB2 SMECQKCSNL--WL-FLETGQLPKDISTDPHD 108
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
1. PB | GO:0032056 | positive regulation of translation in response to stress |
1. PB | GO:0016021 | integral component of membrane |
2. P | GO:0008535 | respiratory chain complex IV assembly |
2. P | GO:0005768 | endosome |
2. P | GO:0009617 | response to bacterium |
2. P | GO:0031307 | integral component of mitochondrial outer membrane |
2. P | GO:1902884 | positive regulation of response to oxidative stress |
2. P | GO:0005747 | mitochondrial respiratory chain complex I |
2. P | GO:0046427 | positive regulation of receptor signaling pathway via JAK-STAT |
2. P | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) |
2. P | GO:0009877 | nodulation |
2. P | GO:0006730 | one-carbon metabolic process |
2. P | GO:0007007 | inner mitochondrial membrane organization |
2. P | GO:0005743 | mitochondrial inner membrane |
2. P | GO:0042407 | cristae formation |
2. P | GO:0070131 | positive regulation of mitochondrial translation |
2. P | GO:0070096 | mitochondrial outer membrane translocase complex assembly |
2. P | GO:0045273 | respiratory chain complex II |
2. P | GO:0061024 | membrane organization |
2. P | GO:0044284 | mitochondrial crista junction |
2. P | GO:0001401 | SAM complex |
2. P | GO:0019867 | outer membrane |
2. P | GO:0032259 | methylation |
2. P | GO:0019386 | methanogenesis, from carbon dioxide |
2. P | GO:0043069 | negative regulation of programmed cell death |
2. P | GO:0005739 | mitochondrion |
2. P | GO:0030269 | tetrahydromethanopterin S-methyltransferase activity |
2. P | GO:0097250 | mitochondrial respirasome assembly |
2. P | GO:0140275 | MIB complex |
2. P | GO:0033617 | mitochondrial cytochrome c oxidase assembly |
2. P | GO:0042717 | plasma membrane-derived chromatophore membrane |
2. P | GO:0006979 | response to oxidative stress |
2. P | GO:0012507 | ER to Golgi transport vesicle membrane |
2. P | GO:0031305 | integral component of mitochondrial inner membrane |
2. P | GO:0061484 | hematopoietic stem cell homeostasis |
2. P | GO:0070072 | vacuolar proton-transporting V-type ATPase complex assembly |
2. P | GO:0005749 | mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) |
2. P | GO:0005789 | endoplasmic reticulum membrane |
2. P | GO:0043495 | protein-membrane adaptor activity |
2. P | GO:0006811 | ion transport |
2. P | GO:0045040 | protein insertion into mitochondrial outer membrane |
2. P | GO:0033116 | endoplasmic reticulum-Golgi intermediate compartment membrane |
2. P | GO:0032981 | mitochondrial respiratory chain complex I assembly |
2. P | GO:0043066 | negative regulation of apoptotic process |
2. P | GO:0061617 | MICOS complex |
3. B | GO:0005746 | mitochondrial respirasome |
3. B | GO:0032731 | positive regulation of interleukin-1 beta production |
3. B | GO:1900227 | positive regulation of NLRP3 inflammasome complex assembly |
3. B | GO:0005758 | mitochondrial intermembrane space |
3. B | GO:0005741 | mitochondrial outer membrane |
3. B | GO:0045087 | innate immune response |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | L0R6Q1 | SLC35A4 upstream open reading frame protein | 0 | 7.73e-129 | 4.70e-70 |
2. P | Q9HFF0 | MICOS complex subunit mic10 | 7.15e-04 | 1.46e-04 | NA |
2. P | A8KB87 | Cytochrome c oxidase assembly factor 3 homolog, mitochondrial | 1.44e-04 | 2.44e-04 | NA |
2. P | Q6GZQ6 | Transmembrane protein 069R | NA | 1.01e-02 | NA |
2. P | Q96I45 | Transmembrane protein 141 | 4.82e-07 | 1.69e-02 | NA |
2. P | Q9AIS6 | Sulfur-rich protein | 6.64e-05 | 2.22e-02 | NA |
2. P | Q50774 | Tetrahydromethanopterin S-methyltransferase subunit G | 6.55e-06 | 2.82e-02 | NA |
2. P | Q3SYY7 | OCIA domain-containing protein 2 | 1.13e-04 | 2.58e-02 | NA |
2. P | O27225 | Tetrahydromethanopterin S-methyltransferase subunit G | 6.72e-06 | 3.39e-02 | NA |
2. P | Q0UV26 | Vacuolar ATPase assembly integral membrane protein VMA21 | 4.48e-05 | 3.51e-02 | NA |
2. P | Q5B905 | Vacuolar ATPase assembly integral membrane protein vma21 | 2.84e-05 | 4.52e-02 | NA |
2. P | P24022 | Bacteriocin lactacin-F subunit LafA | 4.83e-03 | 4.26e-02 | NA |
2. P | Q58263 | Tetrahydromethanopterin S-methyltransferase subunit G | 8.84e-07 | 7.42e-04 | NA |
2. P | Q7RYI0 | MICOS complex subunit mic10 | 7.47e-06 | 2.00e-15 | NA |
2. P | Q6ZCC4 | Succinate dehydrogenase subunit 6, mitochondrial | 2.69e-04 | 1.66e-13 | NA |
2. P | A2AJB2 | Transmembrane protein 141 | 3.29e-07 | 2.00e-04 | NA |
2. P | P0DJZ1 | Uncharacterized protein X | NA | 1.72e-02 | NA |
2. P | A7F5K4 | Vacuolar ATPase assembly integral membrane protein vma21 | 6.63e-05 | 6.53e-04 | NA |
2. P | Q941A6 | Succinate dehydrogenase subunit 6, mitochondrial | 2.13e-05 | 3.75e-07 | NA |
2. P | Q7S158 | Vacuolar ATPase assembly integral membrane protein vma-21 | 4.14e-07 | 2.70e-02 | NA |
2. P | Q9BW72 | HIG1 domain family member 2A, mitochondrial | 6.25e-04 | 3.56e-03 | NA |
2. P | Q56VL3 | OCIA domain-containing protein 2 | 4.27e-05 | 5.57e-03 | NA |
2. P | O05329 | ATP synthase protein I | 2.40e-06 | 7.43e-08 | NA |
2. P | B2RYW8 | MICOS complex subunit Mic10 | 9.05e-05 | 1.63e-06 | NA |
2. P | Q9CQC7 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 | 8.13e-04 | 3.11e-02 | NA |
2. P | Q96VH5 | MICOS complex subunit MIC10 | 6.64e-05 | 9.17e-12 | NA |
2. P | Q9D8W7 | OCIA domain-containing protein 2 | 2.51e-05 | 2.82e-02 | NA |
2. P | Q21154 | MICOS complex subunit MIC27 | 4.38e-05 | 1.01e-02 | NA |
2. P | Q9CN31 | Uncharacterized protein PM0614 | 9.17e-05 | 7.94e-04 | NA |
2. P | Q7TNS2 | MICOS complex subunit Mic10 | 5.51e-05 | 4.84e-06 | NA |
2. P | Q75D23 | Cytochrome c oxidase assembly protein COX20, mitochondrial | 6.55e-04 | 6.75e-03 | NA |
2. P | B6K2Z6 | Respiratory supercomplex factor 1, mitochondrial | 9.68e-04 | 6.10e-04 | NA |
2. P | P0DKM0 | Cytochrome c oxidase assembly factor 3, mitochondrial | 6.15e-05 | 4.45e-04 | NA |
2. P | P48305 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 | 5.27e-04 | 7.27e-04 | NA |
2. P | Q751T2 | MICOS complex subunit MIC10 | 4.45e-05 | 2.24e-10 | NA |
2. P | Q9CQ00 | Distal membrane-arm assembly complex protein 1 | 1.59e-04 | 7.20e-04 | NA |
2. P | P62512 | Mitochondrial import protein 1 | 1.22e-02 | 4.80e-02 | NA |
2. P | Q9CQJ1 | HIG1 domain family member 2A | 6.61e-05 | 2.68e-02 | NA |
2. P | G2TRP9 | Cytochrome c oxidase assembly protein cox20, mitochondrial | 1.18e-04 | 2.71e-03 | NA |
2. P | O74992 | Uncharacterized membrane protein C338.18 | 2.33e-05 | 9.82e-03 | NA |
2. P | Q02921 | Early nodulin-93 | 1.60e-06 | 5.58e-08 | NA |
2. P | A4R0J5 | Vacuolar ATPase assembly integral membrane protein VMA21 | 4.30e-05 | 1.90e-04 | NA |
2. P | Q47710 | Uncharacterized protein YqjK | 3.05e-06 | 1.43e-05 | NA |
2. P | Q58911 | Uncharacterized protein MJ1516 | 3.62e-03 | 1.10e-03 | NA |
2. P | Q2HDV5 | Vacuolar ATPase assembly integral membrane protein VMA21 | 1.23e-04 | 7.94e-04 | NA |
2. P | P15011 | ATP synthase protein I | 1.44e-04 | 3.73e-05 | NA |
2. P | Q5TGZ0 | MICOS complex subunit MIC10 | 3.96e-05 | 5.54e-05 | NA |
2. P | Q0CXF5 | Vacuolar ATPase assembly integral membrane protein vma21 | 5.97e-05 | 2.65e-02 | NA |
2. P | B2WDD8 | Vacuolar ATPase assembly integral membrane protein vma21 | 2.99e-05 | 2.28e-02 | NA |
2. P | Q9ZEC0 | Uncharacterized protein RP024 | 3.05e-04 | 3.53e-05 | NA |
2. P | Q3SZU9 | Transmembrane protein 141 | 9.65e-07 | 1.56e-02 | NA |
2. P | Q9UTB1 | HIG1 domain-containing protein C25B8.07c, mitochondrial | 3.12e-03 | 2.90e-03 | NA |
2. P | Q0MQD0 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 | 2.09e-02 | 6.94e-03 | NA |
3. B | P0DP99 | Short transmembrane mitochondrial protein 1 | 1.91e-03 | NA | 0.010 |
3. B | E0CX11 | Short transmembrane mitochondrial protein 1 | 8.92e-04 | NA | 0.011 |
3. B | B3DFW5 | Short transmembrane mitochondrial protein 1 | 7.39e-04 | NA | 0.002 |