Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
B1ARI9
(Proline-rich protein 29) with a FATCAT P-Value: 2.28e-05 and RMSD of 2.63 angstrom. The sequence alignment identity is 64.1%.
Structural alignment shown in left. Query protein P0C7W0 colored as red in alignment, homolog B1ARI9 colored as blue.
Query protein P0C7W0 is also shown in right top, homolog B1ARI9 showed in right bottom. They are colored based on secondary structures.
P0C7W0 MAS-GAGGSW-GRSPPQSAVPTPWVTFLQPLSWAVPPAPPQPGRVKEDLLELMMLQNAQMHQLLLSRLVAGALQPRPASPCPQVYLEVPQEEPEEEEEEM 98 B1ARI9 MASLGS-GNWSG-VPTQSTAPMPWVTILQPFPWTVPSSQPQHNRVKEDLLELMMLQNAQMHQLLLGQLVADALNPGPEWPSPPVHTD--SHE-EQMEEEM 95 P0C7W0 DVREKGPLVFHHHYLPYLMP-SP-GAL-LPWPAPFFPTPACQPYLQDVPRIQHC-PASREREVRAVPPPPPPSATGTVGADVPPASDYYDAESLL 189 B1ARI9 EMQEQEPLVYHHHYLP--CPVTPLGPMSL-WPASFLPVPPHQPPWQGEPRIQHQPPASRQEEVRDVPPPPPPSATGTVGADVPPASDYYDAESLP 187
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0032418 | lysosome localization |
2. P | GO:0030968 | endoplasmic reticulum unfolded protein response |
2. P | GO:0016192 | vesicle-mediated transport |
2. P | GO:0006990 | positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response |
2. P | GO:0007186 | G protein-coupled receptor signaling pathway |
2. P | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
2. P | GO:0000398 | mRNA splicing, via spliceosome |
2. P | GO:0099078 | BORC complex |
2. P | GO:0006364 | rRNA processing |
2. P | GO:0006355 | regulation of transcription, DNA-templated |
2. P | GO:0030308 | negative regulation of cell growth |
2. P | GO:0010674 | negative regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle |
2. P | GO:0030688 | preribosome, small subunit precursor |
2. P | GO:0031225 | anchored component of membrane |
2. P | GO:0045893 | positive regulation of transcription, DNA-templated |
2. P | GO:0005730 | nucleolus |
2. P | GO:0034976 | response to endoplasmic reticulum stress |
2. P | GO:0005684 | U2-type spliceosomal complex |
2. P | GO:0005765 | lysosomal membrane |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | P0C7W0 | Proline-rich protein 29 | 0 | 1.81e-155 | 7.06e-133 |
1. PB | B1ARI9 | Proline-rich protein 29 | 2.28e-05 | 1.17e-57 | 2.91e-56 |
2. P | Q9UJW9 | SERTA domain-containing protein 3 | 1.90e-01 | 9.41e-03 | NA |
2. P | Q6DBR9 | KxDL motif-containing protein 1 | 6.88e-02 | 4.66e-03 | NA |
2. P | Q9ERC3 | SERTA domain-containing protein 3 | 1.32e-01 | 4.91e-03 | NA |
2. P | B8AN27 | Guanine nucleotide-binding protein subunit gamma 1 | 5.24e-02 | 1.11e-02 | NA |
2. P | P41546 | Transcriptional activator HAC1 | 7.80e-02 | 3.99e-03 | NA |
2. P | A1CF47 | rRNA-processing protein efg1 | 2.97e-01 | 2.42e-02 | NA |
2. P | Q75WU1 | Guanine nucleotide-binding protein subunit gamma 1 | 6.63e-02 | 1.11e-02 | NA |
2. P | P53854 | Pre-mRNA-splicing factor CWC25 | 1.10e-01 | 1.22e-03 | NA |
2. P | A6RVU0 | rRNA-processing protein efg1 | 1.67e-01 | 2.54e-02 | NA |
2. P | A7EPT0 | rRNA-processing protein efg1 | 1.54e-01 | 1.20e-03 | NA |
2. P | Q10019 | Uncharacterized protein T25D10.4 | 1.46e-01 | 4.77e-07 | NA |
3. B | P58505 | Uncharacterized protein C21orf58 | 6.08e-02 | NA | 0.002 |