Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
A6NEW6
(Putative protein FAM90A16P/FAM90A17P) with a FATCAT P-Value: 4.88e-07 and RMSD of 6.85 angstrom. The sequence alignment identity is 98.1%.
Structural alignment shown in left. Query protein P0C7W9 colored as red in alignment, homolog A6NEW6 colored as blue.
Query protein P0C7W9 is also shown in right top, homolog A6NEW6 showed in right bottom. They are colored based on secondary structures.
P0C7W9 MMARRDPTSWAKRLVRAQTLQKQRRAPVGPRAPPPDEEDPRLKCKNCGAFGHTARSTRCPMKCWKAALVPATLGKKEGKENLKPWKPRVEANPGPLNKDK 100 A6NEW6 MMARRDPKSWAKRLVRAQTLQKQRRAPVGPRAPPPDEEDPRLKCKNCGAFGHTARSTRCPMKCWKAALVPATLGKKEGKENLKPWKPRVEANPGPLNKDK 100 P0C7W9 GEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTEPSDYLRVASGPMPVHTTSKRPRLDPVLADRSATEMSGRGSVLASLSPLRKASLSSSSSLGPK 200 A6NEW6 GEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTESSDHLRVASGPMPVHTTSKRPRVDPVLADRSAAEMSGRGSVLASLSPLRKASLSSSSSLGPK 200 P0C7W9 ERQTGAAADMPQPAVRHQGREPLLVVKPTHSRPEGDCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRPAQAPIQA 300 A6NEW6 ERQTGAAADIPQPAVRHQGREPLLVVKPTHSRPEGGCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRPAQAPIQA 300 P0C7W9 CLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGRRTPAQVPSVDRQPPHSRPCLPTAQACTMSHHPAASHDGAQPLRVLFRRLE 400 A6NEW6 CLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGRRTPAQVPSVDRQPPHSTPCLPTAQACTMSHHSAASHDGAQPLRVLFRRLE 400 P0C7W9 NGRWSSSLLAAPSFHSPEKPGAFLAQSPHVSEKSEAPCVRVPPSVLYEDLQVSSSSEDSDSDLE 464 A6NEW6 NGRWSSSLLAAPSFHSPEKPGAFLAQSPHVSEKSEAPCVRVPPSVLYEDLQVSSSSEDSDSDLE 464
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:1905168 | positive regulation of double-strand break repair via homologous recombination |
2. P | GO:0003682 | chromatin binding |
2. P | GO:0016973 | poly(A)+ mRNA export from nucleus |
2. P | GO:0005813 | centrosome |
2. P | GO:0009792 | embryo development ending in birth or egg hatching |
2. P | GO:0006334 | nucleosome assembly |
2. P | GO:0007051 | spindle organization |
2. P | GO:0006974 | cellular response to DNA damage stimulus |
2. P | GO:1903863 | P granule assembly |
2. P | GO:0010212 | response to ionizing radiation |
2. P | GO:0009908 | flower development |
2. P | GO:0042995 | cell projection |
2. P | GO:0019901 | protein kinase binding |
2. P | GO:2001032 | regulation of double-strand break repair via nonhomologous end joining |
2. P | GO:0010847 | regulation of chromatin assembly |
2. P | GO:0007095 | mitotic G2 DNA damage checkpoint signaling |
2. P | GO:0009910 | negative regulation of flower development |
2. P | GO:0071168 | protein localization to chromatin |
2. P | GO:0043486 | histone exchange |
2. P | GO:0003729 | mRNA binding |
2. P | GO:0045860 | positive regulation of protein kinase activity |
2. P | GO:0005654 | nucleoplasm |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | A8MXJ8 | Putative protein FAM90A5P | 5.30e-05 | 1.97e-111 | 0.0 |
1. PB | P0C7W9 | Putative protein FAM90A14P | 0 | 4.50e-142 | 0.0 |
1. PB | P0C7V4 | Putative protein FAM90A15P | 1.79e-05 | 3.04e-125 | 0.0 |
1. PB | P0C7W8 | Putative protein FAM90A13P | 4.25e-05 | 1.76e-125 | 0.0 |
1. PB | A6NIJ5 | Putative protein FAM90A20P | 1.28e-04 | 2.84e-78 | 0.0 |
1. PB | A6NNJ1 | Putative protein FAM90A9P | 9.71e-06 | 1.32e-84 | 0.0 |
1. PB | A6NE21 | Putative protein FAM90A18P/FAM90A19P | 3.71e-06 | 1.10e-80 | 0.0 |
1. PB | Q86YD7 | Protein FAM90A1 | 1.74e-04 | 1.55e-75 | 0.0 |
1. PB | A6NEW6 | Putative protein FAM90A16P/FAM90A17P | 4.88e-07 | 1.11e-106 | 0.0 |
1. PB | A6NJQ4 | Putative protein FAM90A8P | 2.30e-05 | 3.56e-101 | 0.0 |
1. PB | D6RGX4 | Putative protein FAM90A26 | 4.51e-04 | 4.32e-86 | 0.0 |
1. PB | A8MWA6 | Putative protein FAM90A22P | 1.19e-05 | 3.23e-95 | 0.0 |
1. PB | A8MXZ1 | Putative protein FAM90A23P | 6.63e-06 | 1.40e-115 | 0.0 |
1. PB | P0C7X0 | Putative protein FAM90A24P | 1.46e-06 | 1.43e-120 | 0.0 |
1. PB | Q658T7 | Putative protein FAM90A2P | 1.07e-04 | 9.40e-54 | 0.0 |
1. PB | A8MX19 | Putative protein FAM90A12P | 3.55e-06 | 2.19e-104 | 0.0 |
1. PB | A6NNH2 | Protein FAM90A27P | 2.79e-03 | 2.30e-35 | 3.82e-43 |
1. PB | A6NDY2 | Putative protein FAM90A10P | 5.44e-07 | 9.55e-80 | 0.0 |
1. PB | A6NKC0 | Putative protein FAM90A7P | 2.50e-06 | 8.03e-90 | 0.0 |
2. P | Q3ZBG8 | MRN complex-interacting protein | 1.96e-01 | 3.89e-02 | NA |
2. P | Q9C5G0 | Protein SUPPRESSOR OF FRI 4 | 9.77e-02 | 4.23e-02 | NA |
2. P | Q5ZK13 | Centrosomal protein kizuna | 8.68e-02 | 2.51e-05 | NA |
2. P | Q2M2Z5 | Centrosomal protein kizuna | 1.22e-01 | 2.12e-02 | NA |
2. P | Q8TAL5 | Uncharacterized protein C9orf43 | 6.27e-01 | 1.91e-03 | NA |
2. P | Q6NZF1 | Zinc finger CCCH domain-containing protein 11A | 3.50e-01 | 2.90e-03 | NA |
2. P | D3YT16 | Enlarged germline granules protein 1 | 4.57e-01 | 4.78e-02 | NA |
2. P | O75152 | Zinc finger CCCH domain-containing protein 11A | 3.75e-01 | 5.31e-03 | NA |
2. P | Q8IMP6 | Protein SPT2 homolog | 2.29e-01 | 1.12e-03 | NA |
2. P | Q5REG6 | Zinc finger CCCH domain-containing protein 11A | 2.19e-01 | 1.59e-02 | NA |
2. P | A0A1B0GTU1 | Zinc finger CCCH domain-containing protein 11B | 8.00e-01 | 3.85e-04 | NA |
2. P | Q5ZJJ1 | Zinc finger CCCH domain-containing protein 11A | 3.18e-01 | 4.19e-04 | NA |
2. P | Q6NTE8 | MRN complex-interacting protein | 2.88e-01 | 1.32e-03 | NA |