Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 3. B was
Q497Q6
(Protein FAM228B) with a FATCAT P-Value: 2.07e-12 and RMSD of 2.27 angstrom. The sequence alignment identity is 55.4%.
Structural alignment shown in left. Query protein P0C875 colored as red in alignment, homolog Q497Q6 colored as blue.
Query protein P0C875 is also shown in right top, homolog Q497Q6 showed in right bottom. They are colored based on secondary structures.
P0C875 ---MKNVDSDDLVTGTLPKLKSSKEWLEPKPLCFMEVLAKEDTEAAIQSILYKENSVIKELDKYLQHHAFLNARRKEMLYKRWVDCVADPLQKKIIEKVC 97 Q497Q6 MTTMKNRSQDDMVTGTLPKLKSSKEWLEPQSLSFMEALAKEDTDAAVQSILYRENYIMKELDKYLHHQDFLNTRRKEMLYKKWVERVADPLQKKIIEKVH 100 P0C875 SHKKIKKRRQGELDGFLKHVNKKGNAFIEHYDPKEYDPFYMSKKDPNFLKVTIPPFHDPLKKAQYDKDNEKRTLLQCETGKIYSIKEFKEVEKVQLHSRF 197 Q497Q6 SHKNIKKRRRQELDNFLKHSNKKGNAFIEHYDPKEYDPFYMSKEDPNFLKVIMPPFRDPLKKAQYDQDDEKRTLLQCETGKIYTMKEFKEIEKAQLHSRF 200 P0C875 PQISNSRHFITPNEWLKLPTRYIESEFCRRRRLKVKVNFNDCSFDLKPLARAPYLLESQEEEKTVIYKNKGSSFLEREPLCYQEGNNPSAKEAISEGYFS 297 Q497Q6 PSISNSRQSMTPNGWLKVPMSYIESEFCKKSR-------------------------------------------------------------------- 232 P0C875 SLSLSQEREEDQDGSPSPRLGLLKLEL 324 Q497Q6 --------------------------- 232
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0043014 | alpha-tubulin binding |
2. P | GO:0008285 | negative regulation of cell population proliferation |
2. P | GO:0030154 | cell differentiation |
2. P | GO:0048487 | beta-tubulin binding |
2. P | GO:0002357 | defense response to tumor cell |
2. P | GO:0007283 | spermatogenesis |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | P0C875 | Protein FAM228B | 0 | 9.33e-152 | 0.0 |
1. PB | A6QQ68 | Protein FAM228B | 1.33e-07 | 4.53e-05 | 3.54e-145 |
2. P | Q68FQ8 | Deleted in lung and esophageal cancer protein 1 homolog | 1.50e-02 | 2.29e-02 | NA |
2. P | Q8WW14 | Uncharacterized protein C10orf82 | 9.92e-02 | 4.94e-02 | NA |
2. P | Q5ZIH9 | Coiled-coil domain-containing protein 174 | 4.59e-02 | 2.48e-02 | NA |
3. B | Q5XIN5 | Protein FAM228A | 7.02e-03 | NA | 2.35e-27 |
3. B | Q86W67 | Protein FAM228A | 9.41e-02 | NA | 2.54e-17 |
3. B | Q32KQ1 | Protein FAM228A | 1.47e-04 | NA | 2.33e-52 |
3. B | Q8CDW1 | Protein FAM228A | 5.01e-03 | NA | 5.51e-22 |
3. B | Q497Q6 | Protein FAM228B | 2.07e-12 | NA | 1.35e-134 |