Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
Q3UKZ7
(ARL14 effector protein-like) with a FATCAT P-Value: 2.39e-11 and RMSD of 2.16 angstrom. The sequence alignment identity is 88.2%.
Structural alignment shown in left. Query protein P0DKL9 colored as red in alignment, homolog Q3UKZ7 colored as blue.
Query protein P0DKL9 is also shown in right top, homolog Q3UKZ7 showed in right bottom. They are colored based on secondary structures.
P0DKL9 MNEQSEKNNSIQERHTDHSFPEKNCQIGQKQLQQIERQLKCLAFRNPGPQVADFNPETRQQKKKARMSKMNEYFSTKYKIMRKYDKSGRLICNDADLCDC 100 Q3UKZ7 MTEPSQKNNSTQQELTNHLFPEKSSQIGQKQLQQIERQLKCLAFQNPGPQVADFNPETRQQKKKARMSKMNEYFSVKYKVMKKYDKSGRLICNDVDLCDC 100 P0DKL9 LEKNCLGCFYPCPKCNSNKCGPECRCNRRWVYDAIVTESGEVISTLPFNVPD 152 Q3UKZ7 LEKNCLGCFYPCPKCNSNKCGPECRCNRRWVYDAIVTESGEVINTLPFSVPD 152
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
1. PB | GO:0005925 | focal adhesion |
1. PB | GO:0005654 | nucleoplasm |
2. P | GO:2000640 | positive regulation of SREBP signaling pathway |
2. P | GO:0097193 | intrinsic apoptotic signaling pathway |
2. P | GO:0046872 | metal ion binding |
2. P | GO:0006924 | activation-induced cell death of T cells |
2. P | GO:0051537 | 2 iron, 2 sulfur cluster binding |
2. P | GO:0000139 | Golgi membrane |
2. P | GO:0001618 | virus receptor activity |
2. P | GO:1901030 | positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway |
2. P | GO:0097191 | extrinsic apoptotic signaling pathway |
2. P | GO:0005758 | mitochondrial intermembrane space |
2. P | GO:0016226 | iron-sulfur cluster assembly |
2. P | GO:0005175 | CD27 receptor binding |
2. P | GO:0032088 | negative regulation of NF-kappaB transcription factor activity |
2. P | GO:0005164 | tumor necrosis factor receptor binding |
3. B | GO:0005829 | cytosol |
3. B | GO:0043231 | intracellular membrane-bounded organelle |
3. B | GO:0005886 | plasma membrane |
3. B | GO:0005730 | nucleolus |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q3UKZ7 | ARL14 effector protein-like | 2.39e-11 | 4.25e-96 | 4.49e-99 |
1. PB | Q8BIX3 | ARL14 effector protein | 1.20e-03 | 7.71e-03 | 1.04e-26 |
1. PB | P0DKL9 | ARL14 effector protein-like | 0 | 5.56e-138 | 4.99e-112 |
2. P | P59692 | Apoptosis regulatory protein Siva | 2.97e-01 | 1.59e-02 | NA |
2. P | Q9H741 | SREBP regulating gene protein | 1.53e-01 | 2.50e-02 | NA |
2. P | O15304 | Apoptosis regulatory protein Siva | 2.52e-01 | 4.85e-05 | NA |
2. P | O10304 | Uncharacterized 13.0 kDa protein | NA | 2.69e-03 | NA |
2. P | A4HT41 | Anamorsin homolog | 7.99e-01 | 5.95e-03 | NA |
2. P | A4H4W7 | Anamorsin homolog | 8.36e-01 | 1.00e-03 | NA |
2. P | O54926 | Apoptosis regulatory protein Siva | 2.14e-01 | 1.62e-02 | NA |
2. P | Q5ZJE4 | SREBP regulating gene protein | 1.62e-01 | 4.26e-02 | NA |
3. B | Q5EA92 | ARL14 effector protein | 5.46e-05 | NA | 1.10e-27 |
3. B | Q5FVK8 | ARL14 effector protein | 8.54e-04 | NA | 7.40e-27 |
3. B | Q8N8R7 | ARL14 effector protein | 1.01e-03 | NA | 1.47e-27 |