Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
E9PI22
(Proline-rich protein 23D1) with a FATCAT P-Value: 6.28e-07 and RMSD of 3.20 angstrom. The sequence alignment identity is 100.0%.
Structural alignment shown in left. Query protein P0DMB1 colored as red in alignment, homolog E9PI22 colored as blue.
Query protein P0DMB1 is also shown in right top, homolog E9PI22 showed in right bottom. They are colored based on secondary structures.
P0DMB1 MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILIL 100 E9PI22 MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSYQSLELPQNQQDSGTEELMIVLEQGTEVRLSLEEVILIL 100 P0DMB1 APETVLQLTLENTVLVIVPEHVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQPLMIPQANHMAGISPSFLVT 200 E9PI22 APETVLQLTLENTVLVIVPEHVLRSEDGLQSPVQIQYIIPSVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQPLMIPQANHMAGISPSFLVT 200 P0DMB1 PLCIPRCRAAFPQCYPLPPTPSPVGRPRPADSSFSLHGMELLCTSSLRPMPPSPSPGPQVYHRVHHRPPSRARRCLFRK 279 E9PI22 PLCIPRCRAAFPQCYPLPPTPSPVGRPRPADSSFSLHGMELLCTSSLRPMPPSPSPGPQVYHRVHHRPPSRARRCLFRK 279
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0032922 | circadian regulation of gene expression |
2. P | GO:0045475 | locomotor rhythm |
2. P | GO:0000785 | chromatin |
2. P | GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
2. P | GO:0070888 | E-box binding |
2. P | GO:0016605 | PML body |
2. P | GO:0000321 | re-entry into mitotic cell cycle after pheromone arrest |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q6ZRT6 | Proline-rich protein 23B | 5.66e-03 | 1.47e-15 | 8.54e-05 |
1. PB | P0DMB1 | Proline-rich protein 23D2 | 0 | 2.13e-151 | 0.0 |
1. PB | A6NEV1 | Proline-rich protein 23A | 3.42e-03 | 5.26e-10 | 0.004 |
1. PB | E9PI22 | Proline-rich protein 23D1 | 6.28e-07 | 2.13e-151 | 0.0 |
2. P | Q9CWP9 | Proline-rich protein 23A3 | 1.91e-03 | 1.41e-12 | NA |
2. P | P40473 | Transcriptional activator POG1 | 4.69e-01 | 4.79e-02 | NA |
2. P | Q0P5M0 | Proline-rich protein 19 | 3.43e-01 | 3.14e-04 | NA |
2. P | Q9UIG5 | Psoriasis susceptibility 1 candidate gene 1 protein | 1.65e-01 | 5.58e-03 | NA |
2. P | Q6ZRP0 | Proline-rich protein 23C | 2.15e-03 | 3.51e-05 | NA |
2. P | Q8N365 | Circadian-associated transcriptional repressor | 3.33e-01 | 1.90e-04 | NA |