Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
Q96HG1
(Small integral membrane protein 10) with a FATCAT P-Value: 1.92e-11 and RMSD of 0.88 angstrom. The sequence alignment identity is 69.0%.
Structural alignment shown in left. Query protein P0DMW4 colored as red in alignment, homolog Q96HG1 colored as blue.
Query protein P0DMW4 is also shown in right top, homolog Q96HG1 showed in right bottom. They are colored based on secondary structures.
P0DMW4 MAA--SAA-LSA---AAAAAALSGLAVRLSRSAAARGSYGAFCKGLTRTLLTFFDLAWRLRMNFPYFYIVASVMLNVRLQVRIE 78 Q96HG1 MEALGSGHYVGGSIRSMAAAALSGLAVRLSRPQGTRGSYGAFCKTLTRTLLTFFDLAWRLRKNFFYFYILASVILNVHLQVYI- 83
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:1990414 | replication-born double-strand break repair via sister chromatid exchange |
2. P | GO:0019054 | modulation by virus of host cellular process |
2. P | GO:0039635 | suppression by virus of host peptidoglycan biosynthetic process |
2. P | GO:0044659 | viral release from host cell by cytolysis |
2. P | GO:0039640 | viral release by cytolysis via suppression of host peptidoglycan biosynthetic process |
2. P | GO:0019835 | cytolysis |
2. P | GO:0006312 | mitotic recombination |
2. P | GO:0005739 | mitochondrion |
2. P | GO:0005741 | mitochondrial outer membrane |
2. P | GO:0008009 | chemokine activity |
2. P | GO:0016021 | integral component of membrane |
2. P | GO:0004857 | enzyme inhibitor activity |
2. P | GO:0000741 | karyogamy |
2. P | GO:0010197 | polar nucleus fusion |
2. P | GO:0020002 | host cell plasma membrane |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | P0DMW4 | Small integral membrane protein 10-like protein 2A | 0 | 4.02e-136 | 1.73e-48 |
1. PB | P0DMW3 | Small integral membrane protein 10-like protein 1 | 1.04e-03 | 2.65e-09 | 1.56e-24 |
1. PB | Q96HG1 | Small integral membrane protein 10 | 1.92e-11 | 1.11e-08 | 5.37e-32 |
1. PB | P0DMW5 | Small integral membrane protein 10-like protein 2B | 4.06e-09 | 4.02e-136 | 1.73e-48 |
2. P | A1L4Q6 | Putative uncharacterized protein FLJ41423 | 1.50e-01 | 5.23e-03 | NA |
2. P | P34249 | Uncharacterized protein YKL102C | 2.44e-01 | 9.35e-05 | NA |
2. P | Q3E7A3 | Uncharacterized protein YJL133C-A | 6.37e-05 | 2.88e-06 | NA |
2. P | P19778 | Insertion element IS2 uncharacterized 11.1 kDa protein | 3.84e-03 | 5.15e-04 | NA |
2. P | P47010 | Putative uncharacterized protein IRC9 | 4.93e-06 | 1.47e-03 | NA |
2. P | P52461 | Putative CC-type chemokine U83 | NA | 9.21e-03 | NA |
2. P | Q6UXU0 | Putative uncharacterized protein UNQ9165/PRO28630 | 6.39e-01 | 3.94e-02 | NA |
2. P | Q93ZJ3 | Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial | 9.32e-02 | 7.33e-05 | NA |
2. P | P38350 | Putative uncharacterized protein YBR277C | 6.20e-02 | 2.03e-03 | NA |
2. P | P25640 | Putative uncharacterized protein YCR064C | 1.16e-01 | 2.34e-02 | NA |
2. P | P03639 | Lysis protein E | NA | 9.42e-04 | NA |
2. P | O13578 | Putative uncharacterized protein YLR415C, mitochondrial | 1.03e-03 | 1.88e-02 | NA |
2. P | P03294 | Uncharacterized protein F-121 | NA | 1.49e-03 | NA |
2. P | A0A023PZI4 | Putative uncharacterized membrane protein YHR069C-A | 2.17e-01 | 6.06e-04 | NA |
2. P | P07930 | Lysis protein | NA | 1.36e-02 | NA |