Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
P86496
(Proline-rich protein 20A) with a FATCAT P-Value: 0.0038 and RMSD of 3.86 angstrom. The sequence alignment identity is 55.4%.
Structural alignment shown in left. Query protein P0DPQ3 colored as red in alignment, homolog P86496 colored as blue.
Query protein P0DPQ3 is also shown in right top, homolog P86496 showed in right bottom. They are colored based on secondary structures.
P0DPQ3 MEEPRHSKRPRFLAPNQASGGPPTEPGCSGVDRE-----D-PVDPVQPAKPTAYVKPMRREPPARAQPAPPAGRGQRGGGSWRAGRGRGSGAGLLRA-LG 93 P86496 MEEPRPSKRLRSMAPNQASGGPPPEPGCCVADPEGSVEADGPAQPAQPAKPIAYVKPFRRQPPARPESPPPAERGRRRGGSRRPGRGRGRRAG-PRGDAG 99 P0DPQ3 ERVG-PGMYL--VHLN-D-HGELGYQGQLEARQTPAFSFTEAALMPGIVQEGPGPHAAQPEVGLQEPPPAPGPVAVARQTMLAPSPSLSFRPPGGSSTLC 188 P86496 QRQGAEGLMAPDVHIQLDHHGEPGHQGEPEITETAAFSLSETGPPPGTVQEGPGPDVAQPELGFQEPPAAPGPQAVDWQPVLTLYPCIGFRALGDSAVLQ 199 P0DPQ3 IVQTSNSTIVQSVPVFPAHSAH 210 P86496 VIQTPQGTYVQGVPVFLTDIAY 221
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
1. PB | GO:0042802 | identical protein binding |
2. P | GO:0045892 | negative regulation of transcription, DNA-templated |
2. P | GO:0003700 | DNA-binding transcription factor activity |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | P86478 | Proline-rich protein 20E | 3.45e-02 | 6.33e-14 | 8.36e-44 |
1. PB | P86481 | Proline-rich protein 20B | 1.92e-02 | 6.33e-14 | 8.36e-44 |
1. PB | P86496 | Proline-rich protein 20A | 3.80e-03 | 6.33e-14 | 8.36e-44 |
1. PB | P0DPQ3 | Proline-rich protein 20G | 0 | 3.93e-133 | 3.67e-148 |
1. PB | P86479 | Proline-rich protein 20C | 3.18e-02 | 6.33e-14 | 8.36e-44 |
1. PB | P86480 | Proline-rich protein 20D | 5.23e-03 | 6.33e-14 | 8.36e-44 |
2. P | Q84X40 | Protein SPEAR1 | 1.16e-01 | 3.96e-04 | NA |