Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
Q8CC14
(Protein FAM216B) with a FATCAT P-Value: 0.038 and RMSD of 3.31 angstrom. The sequence alignment identity is 20.0%.
Structural alignment shown in left. Query protein Q0P641 colored as red in alignment, homolog Q8CC14 colored as blue.
Query protein Q0P641 is also shown in right top, homolog Q8CC14 showed in right bottom. They are colored based on secondary structures.
Q0P641 MERRLIKKEMKKLLGDYI-GI-RLR------ENEF--D-PKGRRQLTFL-DDMAHYDLAISVALQWLDPSEDLTWLEWEELKIP-LH--GRPIYPNR--- 82 Q8CC14 ---------MWKDLPQNVPRIPRIQVPAAAADNSLLKDLNQGQR--CYLYSIMRIYD---S------RP-------QWKALQTRYIHSLG---YQQHLGY 70 Q0P641 -REREAMILSSYAGIL----MN---SI-P----IEEVFKIYGADSSADSG-TIKVP--RVSSLCLSLHPFAML---TAPKAAAYARKQSVKSRKVTTNKN 163 Q8CC14 ITQQEA--LSC-AAVLRHSTMRASATVAPQRTILPRVF------SHAKKGQPAK-PGFRVGSRA-SLH--SMLSTKTLDKA------------------- 138 Q0P641 ATSISAKEANATEWKSSQRFSDTQPKHKVT 193 Q8CC14 ------------------------------ 138
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0071005 | U2-type precatalytic spliceosome |
2. P | GO:0019029 | helical viral capsid |
2. P | GO:0016020 | membrane |
2. P | GO:0009399 | nitrogen fixation |
2. P | GO:0000398 | mRNA splicing, via spliceosome |
2. P | GO:0030430 | host cell cytoplasm |
2. P | GO:0005686 | U2 snRNP |
2. P | GO:0019058 | viral life cycle |
2. P | GO:0020002 | host cell plasma membrane |
2. P | GO:0071011 | precatalytic spliceosome |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q0P641 | Uncharacterized protein C2orf80 | 0 | 5.47e-139 | 1.43e-143 |
1. PB | Q8C3M9 | Uncharacterized protein C2orf80 homolog | 1.60e-05 | 3.59e-11 | 1.31e-85 |
1. PB | Q5RDL5 | Uncharacterized protein C2orf80 homolog | 1.39e-04 | 1.99e-15 | 4.13e-105 |
2. P | P93310 | Uncharacterized mitochondrial protein AtMg00550 | 2.00e-01 | 1.77e-02 | NA |
2. P | Q55BF5 | Splicing factor 3B subunit 5 | 4.22e-02 | 3.66e-02 | NA |
2. P | Q00247 | Uncharacterized 15.3 kDa protein in frxC 3'region | 6.77e-02 | 2.84e-02 | NA |
2. P | P16486 | Coat protein | NA | 4.04e-03 | NA |
2. P | P12452 | Virion infectivity factor | NA | 3.25e-02 | NA |
2. P | P89905 | Virion infectivity factor | NA | 9.82e-04 | NA |
2. P | Q02841 | Virion infectivity factor | NA | 9.06e-04 | NA |
2. P | Q91BI6 | Late expression factor 11 | NA | 9.56e-03 | NA |
2. P | P05903 | Virion infectivity factor | NA | 3.76e-02 | NA |
2. P | Q8CC14 | Protein FAM216B | 3.80e-02 | 7.70e-04 | NA |
2. P | P19506 | Virion infectivity factor | NA | 1.24e-02 | NA |
2. P | Q2J4G6 | Nitrogenase-stabilizing/protective protein NifW | 4.94e-02 | 1.60e-02 | NA |