Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
P0CH98
(Protein FAM106C) with a FATCAT P-Value: 0.00995 and RMSD of 4.39 angstrom. The sequence alignment identity is 98.8%.
Structural alignment shown in left. Query protein Q4KMX7 colored as red in alignment, homolog P0CH98 colored as blue.
Query protein Q4KMX7 is also shown in right top, homolog P0CH98 showed in right bottom. They are colored based on secondary structures.
Q4KMX7 MLPSTMFLVHLPLSTNRLHCLRNTSLESYLCSFVHLNHPLHISDRVILISLHEAVRFSFAFSFPRGTLSIAYCLMSSVSTSSEAIMSTELLANYCHSSLH 100 P0CH98 MLPSTMFLVHLPLSTNRLHCLRNTSLESCLCSFVHLNHPLHISDPVILISLHEAVRFSFAFSFPRGTLSIAYCLMSSVSTSSEAIMSTELLANYCHSSLH 100 Q4KMX7 VCICISSFPNETGNHDSFPGAVVSISDQPTDQCKLAAKELPLRNLLECRFFDCMGEEDLINLGVIGTER 169 P0CH98 VCICISSFPNETGNHDSFPGAVVSISDQPTDQCKLAAKELPLRNLLECRFFDCMGEEDLINLGVIGTER 169
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0030833 | regulation of actin filament polymerization |
2. P | GO:0051650 | establishment of vesicle localization |
2. P | GO:0016324 | apical plasma membrane |
2. P | GO:0010215 | cellulose microfibril organization |
2. P | GO:0017157 | regulation of exocytosis |
2. P | GO:0040008 | regulation of growth |
2. P | GO:0009860 | pollen tube growth |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q4KMX7 | Protein FAM106A | 0 | 1.89e-148 | 1.61e-121 |
1. PB | P0CH98 | Protein FAM106C | 9.95e-03 | 1.82e-46 | 3.26e-118 |
2. P | A1L4Q6 | Putative uncharacterized protein FLJ41423 | 3.02e-01 | 4.67e-02 | NA |
2. P | A6NEH8 | Putative uncharacterized protein encoded by ZNF503-AS2 | 4.35e-01 | 1.64e-02 | NA |
2. P | P53071 | Uncharacterized protein YGL235W | 6.97e-01 | 2.96e-05 | NA |
2. P | Q9FFD5 | CRIB domain-containing protein RIC4 | 4.43e-01 | 3.05e-02 | NA |
2. P | P03124 | Probable protein E4 | NA | 3.00e-02 | NA |
2. P | P14723 | Uncharacterized 16 kDa protein in middle repetitive insertion sequence WIS1 | 4.00e-01 | 1.26e-03 | NA |