Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
Q9UUD6
(Ubiquitin carboxyl-terminal hydrolase 11) with a FATCAT P-Value: 1.63e-05 and RMSD of 3.06 angstrom. The sequence alignment identity is 21.2%.
Structural alignment shown in left. Query protein Q4W4Y0 colored as red in alignment, homolog Q9UUD6 colored as blue.
Query protein Q4W4Y0 is also shown in right top, homolog Q9UUD6 showed in right bottom. They are colored based on secondary structures.
Q4W4Y0 --------------------------------------MKTLFEEIK-ASIKNNYN---QDRSF--CRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNT 56 Q9UUD6 MSTTPLSISRAKKYKTVFKGAAILTTFAALYIVTSPSTGKRL---VKNASIKGLYNVSGND-CFLNC--VLQ-----SL-ASQESL------LEI-LKLR 81 Q4W4Y0 CTIDGFLMLLYVILNE-NENFP-RELSLHFGREFVDCFLYLMDTYSFTTVKLLW-IWDKMEKQQYKSEV-HKASLI--IDLFGNEHD-NFTKNL----EN 145 Q9UUD6 CSSSTLYATLYELLQKLNSG-PGNPITP--GS-FLNS-LEI-----ATNKKLVRSI--QQDAQEF---LQH---LVETLEL-QKPHTYKWSKVLSFPVDS 162 Q4W4Y0 -LMSTI-QESYCSNWRC-PTRVQEDQQRTININ-PPQEIPHGN----LIRL--A-----VNELFCSKIELC----EEH---GCGGLR--EFSQRIFCHGA 221 Q9UUD6 PFIGTMEQKVQCCQ--CLAISISYSTATSIQLCLPPEY--SGNSNVSLLSLMEADREQHISDYKCDS---CFKSSPKHSKTSC--IRTVDWKN------- 246 Q4W4Y0 PPFVVLNMQHWKSEDLAYVPYYL---DLS---DHKYLLEGATLFNKEEHHY---SAAFQIG----GHWMHY---DGL---RNVNLIL---LNKPPEFL-- 297 Q9UUD6 PP-TILQIQ---LERTSYTCQGLTRNNVSISFPSK-LI----LKNK--HHYILRSLITHSGSVTYGHYLCYRLQDDIWWKANDSLITKSSLN---EALSQ 332 Q4W4Y0 LLSS--LVYIRATEK----- 310 Q9UUD6 TRSACLLFY--EMESPLALD 350
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0048149 | behavioral response to ethanol |
2. P | GO:0071819 | DUBm complex |
2. P | GO:0030374 | nuclear receptor coactivator activity |
2. P | GO:0071947 | protein deubiquitination involved in ubiquitin-dependent protein catabolic process |
2. P | GO:0000425 | pexophagy |
2. P | GO:0000422 | autophagy of mitochondrion |
2. P | GO:0007610 | behavior |
2. P | GO:0000245 | spliceosomal complex assembly |
2. P | GO:0016578 | histone deubiquitination |
2. P | GO:0006511 | ubiquitin-dependent protein catabolic process |
2. P | GO:0043197 | dendritic spine |
2. P | GO:0006325 | chromatin organization |
2. P | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process |
2. P | GO:0035871 | protein K11-linked deubiquitination |
2. P | GO:0007265 | Ras protein signal transduction |
2. P | GO:0090326 | positive regulation of locomotion involved in locomotory behavior |
2. P | GO:0061578 | Lys63-specific deubiquitinase activity |
2. P | GO:0004197 | cysteine-type endopeptidase activity |
2. P | GO:1900227 | positive regulation of NLRP3 inflammasome complex assembly |
2. P | GO:0000502 | proteasome complex |
2. P | GO:0016574 | histone ubiquitination |
2. P | GO:1903070 | negative regulation of ER-associated ubiquitin-dependent protein catabolic process |
2. P | GO:0030496 | midbody |
2. P | GO:0005634 | nucleus |
2. P | GO:0035521 | monoubiquitinated histone deubiquitination |
2. P | GO:0008053 | mitochondrial fusion |
2. P | GO:0034729 | histone H3-K79 methylation |
2. P | GO:0031647 | regulation of protein stability |
2. P | GO:0019897 | extrinsic component of plasma membrane |
2. P | GO:0007032 | endosome organization |
2. P | GO:0045494 | photoreceptor cell maintenance |
2. P | GO:0090543 | Flemming body |
2. P | GO:0031313 | extrinsic component of endosome membrane |
2. P | GO:0031410 | cytoplasmic vesicle |
2. P | GO:0060628 | regulation of ER to Golgi vesicle-mediated transport |
2. P | GO:0050920 | regulation of chemotaxis |
2. P | GO:0019783 | ubiquitin-like protein-specific protease activity |
2. P | GO:0071629 | cytoplasm protein quality control by the ubiquitin-proteasome system |
2. P | GO:0032228 | regulation of synaptic transmission, GABAergic |
2. P | GO:0070628 | proteasome binding |
2. P | GO:0019899 | enzyme binding |
2. P | GO:0005737 | cytoplasm |
2. P | GO:0098978 | glutamatergic synapse |
2. P | GO:0032731 | positive regulation of interleukin-1 beta production |
2. P | GO:0032741 | positive regulation of interleukin-18 production |
2. P | GO:0008270 | zinc ion binding |
2. P | GO:0099149 | regulation of postsynaptic neurotransmitter receptor internalization |
2. P | GO:0001662 | behavioral fear response |
2. P | GO:1905538 | polysome binding |
2. P | GO:0005838 | proteasome regulatory particle |
2. P | GO:0044313 | protein K6-linked deubiquitination |
2. P | GO:0050862 | positive regulation of T cell receptor signaling pathway |
2. P | GO:0004843 | thiol-dependent deubiquitinase |
2. P | GO:0016579 | protein deubiquitination |
2. P | GO:0046695 | SLIK (SAGA-like) complex |
2. P | GO:2000311 | regulation of AMPA receptor activity |
2. P | GO:0035634 | response to stilbenoid |
2. P | GO:0008343 | adult feeding behavior |
2. P | GO:0060339 | negative regulation of type I interferon-mediated signaling pathway |
2. P | GO:0004866 | endopeptidase inhibitor activity |
2. P | GO:0000124 | SAGA complex |
2. P | GO:0045931 | positive regulation of mitotic cell cycle |
2. P | GO:0008595 | anterior/posterior axis specification, embryo |
2. P | GO:0019785 | ISG15-specific protease activity |
2. P | GO:0061136 | regulation of proteasomal protein catabolic process |
2. P | GO:0043967 | histone H4 acetylation |
2. P | GO:0003407 | neural retina development |
2. P | GO:0005829 | cytosol |
2. P | GO:0036464 | cytoplasmic ribonucleoprotein granule |
2. P | GO:0045202 | synapse |
2. P | GO:1990841 | promoter-specific chromatin binding |
2. P | GO:0045087 | innate immune response |
2. P | GO:0039557 | suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF7 activity |
2. P | GO:0010485 | H4 histone acetyltransferase activity |
2. P | GO:1990380 | Lys48-specific deubiquitinase activity |
2. P | GO:0072671 | mitochondria-associated ubiquitin-dependent protein catabolic process |
2. P | GO:1901525 | negative regulation of mitophagy |
2. P | GO:1901562 | response to paraquat |
2. P | GO:1901799 | negative regulation of proteasomal protein catabolic process |
2. P | GO:0101005 | deubiquitinase activity |
2. P | GO:0050727 | regulation of inflammatory response |
2. P | GO:2001056 | positive regulation of cysteine-type endopeptidase activity |
2. P | GO:0071108 | protein K48-linked deubiquitination |
2. P | GO:0070536 | protein K63-linked deubiquitination |
2. P | GO:0032434 | regulation of proteasomal ubiquitin-dependent protein catabolic process |
2. P | GO:0035520 | monoubiquitinated protein deubiquitination |
2. P | GO:0035063 | nuclear speck organization |
2. P | GO:0005741 | mitochondrial outer membrane |
2. P | GO:0070911 | global genome nucleotide-excision repair |
2. P | GO:0001917 | photoreceptor inner segment |
2. P | GO:0060013 | righting reflex |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q2KIN3 | Uncharacterized protein C14orf28 homolog | 4.00e-06 | 1.17e-71 | 0.0 |
1. PB | Q4KL13 | Uncharacterized protein C14orf28 homolog | 0.00e+00 | 2.95e-113 | 0.0 |
1. PB | Q4W4Y0 | Uncharacterized protein C14orf28 | 0 | 6.38e-143 | 0.0 |
2. P | O94269 | Probable ubiquitin carboxyl-terminal hydrolase 3 | 1.30e-02 | 4.02e-05 | NA |
2. P | P06440 | Major core protein 4b | NA | 1.95e-03 | NA |
2. P | P39967 | Ubiquitin carboxyl-terminal hydrolase 9 | 1.08e-01 | 9.91e-03 | NA |
2. P | Q6P8X6 | Putative ubiquitin carboxyl-terminal hydrolase 50 | 8.41e-03 | 2.90e-11 | NA |
2. P | Q9D9M2 | Ubiquitin carboxyl-terminal hydrolase 12 | 1.43e-03 | 8.96e-14 | NA |
2. P | Q9UPT9 | Ubiquitin carboxyl-terminal hydrolase 22 | 8.85e-04 | 1.37e-04 | NA |
2. P | Q9W462 | Ubiquitin carboxyl-terminal hydrolase 30 homolog | 1.41e-01 | 3.58e-07 | NA |
2. P | P43593 | Ubiquitin carboxyl-terminal hydrolase 6 | 2.44e-02 | 1.62e-08 | NA |
2. P | A5D9H7 | Ubiquitin carboxyl-terminal hydrolase 12 | 1.49e-03 | 1.24e-13 | NA |
2. P | Q9WTV6 | Ubl carboxyl-terminal hydrolase 18 | 2.28e-04 | 3.44e-19 | NA |
2. P | A2BGT0 | Ubiquitin carboxyl-terminal hydrolase 30 | 2.21e-01 | 7.63e-09 | NA |
2. P | P62069 | Ubiquitin carboxyl-terminal hydrolase 46 | 2.21e-04 | 3.39e-14 | NA |
2. P | A4FUN7 | Ubiquitin carboxyl-terminal hydrolase 12A | 1.17e-03 | 1.07e-14 | NA |
2. P | Q9UMW8 | Ubl carboxyl-terminal hydrolase 18 | 9.38e-04 | 4.99e-18 | NA |
2. P | C0HB46 | Ubiquitin carboxyl-terminal hydrolase 12 | 1.53e-03 | 3.55e-14 | NA |
2. P | Q6DCJ1 | Ubiquitin carboxyl-terminal hydrolase 22-B | 6.06e-03 | 6.67e-03 | NA |
2. P | Q3UN04 | Ubiquitin carboxyl-terminal hydrolase 30 | 3.58e-02 | 1.18e-05 | NA |
2. P | O96612 | Ubiquitin hydrolase B | 1.03e-02 | 2.18e-15 | NA |
2. P | P54578 | Ubiquitin carboxyl-terminal hydrolase 14 | 1.69e-02 | 2.45e-09 | NA |
2. P | Q5UPW7 | Putative ubiquitin carboxyl-terminal hydrolase L293 | NA | 1.45e-07 | NA |
2. P | Q84WC6 | Ubiquitin carboxyl-terminal hydrolase 7 | 2.31e-02 | 1.45e-06 | NA |
2. P | Q8CEG8 | Ubiquitin carboxyl-terminal hydrolase 27 | 3.99e-04 | 4.33e-12 | NA |
2. P | A4QNN3 | Ubiquitin carboxyl-terminal hydrolase 30 | 4.45e-02 | 3.75e-09 | NA |
2. P | Q8LAM0 | Ubiquitin carboxyl-terminal hydrolase 4 | 5.47e-03 | 9.47e-13 | NA |
2. P | Q70EL2 | Ubiquitin carboxyl-terminal hydrolase 45 | 3.69e-01 | 2.34e-03 | NA |
2. P | Q4R6D3 | Putative ubiquitin carboxyl-terminal hydrolase 50 | 2.61e-04 | 2.68e-13 | NA |
2. P | Q9Y6I4 | Ubiquitin carboxyl-terminal hydrolase 3 | 3.80e-02 | 1.88e-02 | NA |
2. P | Q02863 | Ubiquitin carboxyl-terminal hydrolase 16 | 5.95e-02 | 1.11e-07 | NA |
2. P | Q5UQR3 | Probable ubiquitin carboxyl-terminal hydrolase R319 | NA | 6.79e-12 | NA |
2. P | Q9JMA1 | Ubiquitin carboxyl-terminal hydrolase 14 | 1.96e-02 | 1.76e-09 | NA |
2. P | A6NNY8 | Ubiquitin carboxyl-terminal hydrolase 27 | 7.92e-03 | 4.98e-13 | NA |
2. P | Q91W36 | Ubiquitin carboxyl-terminal hydrolase 3 | 4.17e-03 | 2.46e-02 | NA |
2. P | Q9USR2 | Probable mRNA-splicing protein ubp10 | 2.74e-02 | 1.75e-03 | NA |
2. P | Q5M981 | Ubiquitin carboxyl-terminal hydrolase 12-B | 2.32e-04 | 1.63e-13 | NA |
2. P | Q9UUD6 | Ubiquitin carboxyl-terminal hydrolase 11 | 1.63e-05 | 6.00e-20 | NA |
2. P | Q70CQ3 | Ubiquitin carboxyl-terminal hydrolase 30 | 2.53e-02 | 4.62e-07 | NA |
2. P | Q9FPS0 | Ubiquitin carboxyl-terminal hydrolase 27 | 1.41e-02 | 3.63e-13 | NA |
2. P | A5WWB0 | Ubiquitin carboxyl-terminal hydrolase 46 | 9.22e-04 | 1.07e-14 | NA |
2. P | P43589 | Pre-mRNA-splicing factor SAD1 | 9.36e-03 | 1.30e-06 | NA |
2. P | P62068 | Ubiquitin carboxyl-terminal hydrolase 46 | 1.78e-03 | 3.39e-14 | NA |
2. P | Q86194 | Non-structural protein 1 | NA | 1.69e-02 | NA |
2. P | P50102 | Ubiquitin carboxyl-terminal hydrolase 8 | 9.02e-03 | 3.63e-03 | NA |
2. P | Q70EL3 | Inactive ubiquitin carboxyl-terminal hydrolase 50 | 4.96e-03 | 3.72e-14 | NA |
2. P | Q0IIF7 | Ubiquitin carboxyl-terminal hydrolase 14 | 1.98e-02 | 2.45e-09 | NA |
2. P | Q3LFD5 | Putative ubiquitin carboxyl-terminal hydrolase 41 | 3.23e-04 | 7.55e-15 | NA |
2. P | Q6GNI6 | Ubiquitin carboxyl-terminal hydrolase 22-A | 6.14e-03 | 9.35e-03 | NA |
2. P | Q09738 | Probable ubiquitin carboxyl-terminal hydrolase 8 | 8.68e-03 | 1.15e-04 | NA |
2. P | O75317 | Ubiquitin carboxyl-terminal hydrolase 12 | 2.30e-03 | 1.37e-13 | NA |
2. P | Q6QN14 | Ubiquitin carboxyl-terminal hydrolase 17-like protein 6 | 4.40e-03 | 2.71e-06 | NA |
2. P | Q52KZ6 | Ubiquitin carboxyl-terminal hydrolase 12-A | 2.35e-04 | 1.31e-13 | NA |
2. P | O74442 | Probable ubiquitin carboxyl-terminal hydrolase 16 | 4.48e-03 | 2.10e-03 | NA |
2. P | P60051 | Ubiquitin carboxyl-terminal hydrolase 14 | 1.68e-02 | 2.59e-09 | NA |
2. P | Q17361 | Ubiquitin carboxyl-terminal hydrolase 14 | 8.00e-03 | 6.28e-04 | NA |
2. P | Q29RP1 | Ubiquitin carboxyl-terminal hydrolase 1 | 2.38e-01 | 3.74e-03 | NA |
2. P | P0C8Z3 | Ubiquitin carboxyl-terminal hydrolase 22 | 5.12e-03 | 4.96e-05 | NA |
2. P | P40826 | Ubiquitin carboxyl-terminal hydrolase 14 | 1.87e-02 | 2.23e-09 | NA |
2. P | Q92353 | Ubiquitin carboxyl-terminal hydrolase 6 | 2.96e-02 | 9.68e-05 | NA |
2. P | Q5DU02 | Ubiquitin carboxyl-terminal hydrolase 22 | 6.27e-03 | 1.20e-04 | NA |
2. P | Q5RBQ4 | Ubiquitin carboxyl-terminal hydrolase 46 | 3.02e-04 | 3.39e-14 | NA |
2. P | O24454 | Ubiquitin carboxyl-terminal hydrolase 3 | 6.64e-03 | 2.78e-11 | NA |
2. P | Q5RE63 | Ubl carboxyl-terminal hydrolase 18 | 3.50e-04 | 1.27e-17 | NA |
2. P | D3ZPG5 | Ubiquitin carboxyl-terminal hydrolase 30 | 4.37e-02 | 2.00e-06 | NA |
2. P | O57429 | Ubiquitin carboxyl-terminal hydrolase 2 | 2.28e-03 | 3.90e-06 | NA |
2. P | Q949Y0 | Ubiquitin carboxyl-terminal hydrolase 6 | 2.39e-02 | 7.30e-06 | NA |
2. P | A6H8I0 | Ubiquitin carboxyl-terminal hydrolase 22 | 7.64e-04 | 6.22e-04 | NA |
2. P | F1M625 | Ubiquitin carboxyl-terminal hydrolase 46 | 2.02e-04 | 2.30e-14 | NA |
2. P | P34547 | Ubiquitin carboxyl-terminal hydrolase 46 | 6.79e-03 | 6.41e-11 | NA |
2. P | Q8K387 | Ubiquitin carboxyl-terminal hydrolase 45 | 1.66e-01 | 4.66e-02 | NA |