Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
A2A6H3
(F-box only protein 47) with a FATCAT P-Value: 0.0 and RMSD of 1.16 angstrom. The sequence alignment identity is 82.8%.
Structural alignment shown in left. Query protein Q5MNV8 colored as red in alignment, homolog A2A6H3 colored as blue.
Query protein Q5MNV8 is also shown in right top, homolog A2A6H3 showed in right bottom. They are colored based on secondary structures.
Q5MNV8 MASRINTNFTLIPNQKLRRSNRQTS--CYSKTLGSGFQPISTFGNFKALPLEIFQIILKYLSVKDISMLSMVSKTVSQHIINYISTSSGSKRLLLQDFHN 98 A2A6H3 MASRVNTSFTLIPKQKCRRSNHHSSYFC--NTLDSDPQLLSTLGNFKVLPLEILHIILRYLSVKDIGMLSMVSKTVSQHIINYISTSSGSRRLLLQNFHD 98 Q5MNV8 LELPDRRQDSAILEHYRSLGLLFKRCTLLLPTKERLKYIHKILTEVSCFKFNGCAAPMQCLGLTCYGMFLQTLTAGWDELECHRVYNFLCELTNLCRKIQ 198 A2A6H3 LDLPGTKEETALLEHYRALGLLFKRCTLLLPTKERLKYIHKILSEVSCFKFSGCSVPLQCLGLSCYGMFLQTLTAGWDELECHRVYNFLCELTNLSRKMQ 198 Q5MNV8 MAVCSKPGSAQKLELRIRLFCRNVLLDHWTHRSDSAFWLTRILKPWPMVNQARLLYIIFGPISPQDGQVVWQEMIEEPTDEFSLKGLADAIKLLYDASTK 298 A2A6H3 TVVCNKPGSARKLELRVRLFCRNVLLDHWTHRSDSAFWLTRILKPWPMVNQARLLYIIFGPTSPHDGQVIWQEMIEGPTDESSLKGLANAIKLLYDTGAK 298 Q5MNV8 EWTADDVISLVDELSVVPREWLLENNARLLMLSGNNICFSFMASKAVNGRTIELARLVVFLALVCEKELYCMDWTVKMMQKVCKVFSTPVERKNFLQNVA 398 A2A6H3 GWTADDVISLVDELSVVPREWLLENNARLLILSGNNICFTFMASKAVNGRAVELARLVVFLALVCEKELYCMDWTVRMMQKVCKVFSTAAERKSFLQSIA 398 Q5MNV8 NAFACVIMEMLQSIMSGDRDEDDRSFLNLFHLVHAQANFHKEVLYLTMNTPLST 452 A2A6H3 NAFACVTMEMLQPVMSGDRDDDDRGFLNLFHLLHAQANFHKEVLYLTMNA-ISS 451
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0016567 | protein ubiquitination |
2. P | GO:0030332 | cyclin binding |
2. P | GO:2001224 | positive regulation of neuron migration |
2. P | GO:0071456 | cellular response to hypoxia |
2. P | GO:0000086 | G2/M transition of mitotic cell cycle |
2. P | GO:0005813 | centrosome |
2. P | GO:0071406 | cellular response to methylmercury |
2. P | GO:0050775 | positive regulation of dendrite morphogenesis |
2. P | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
2. P | GO:0006974 | cellular response to DNA damage stimulus |
2. P | GO:0043153 | entrainment of circadian clock by photoperiod |
2. P | GO:0031145 | anaphase-promoting complex-dependent catabolic process |
2. P | GO:0019218 | regulation of steroid metabolic process |
2. P | GO:0019005 | SCF ubiquitin ligase complex |
2. P | GO:0030018 | Z disc |
2. P | GO:0031571 | mitotic G1 DNA damage checkpoint signaling |
2. P | GO:0043025 | neuronal cell body |
2. P | GO:0030674 | protein-macromolecule adaptor activity |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q5MNV8 | F-box only protein 47 | 0 | 2.01e-133 | 0.0 |
1. PB | A2A6H3 | F-box only protein 47 | 0.00e+00 | 3.93e-86 | 0.0 |
2. P | Q03787 | Uncharacterized protein YDR249C | 7.69e-02 | 4.18e-05 | NA |
2. P | Q9QZN0 | F-box only protein 15 | 4.11e-01 | 1.53e-03 | NA |
2. P | Q9LND7 | F-box protein SKIP16 | 3.58e-01 | 2.89e-02 | NA |
2. P | Q2V3R1 | F-box protein At3g44326 | 1.05e-01 | 5.79e-04 | NA |
2. P | Q9SIH5 | Probable F-box protein At2g36090 | 8.49e-02 | 2.19e-05 | NA |
2. P | B2RYN2 | F-box only protein 31 | 5.08e-01 | 7.18e-04 | NA |
2. P | Q9LM18 | F-box protein AUF2 | 3.01e-01 | 1.05e-03 | NA |
2. P | Q9CAZ0 | F-box protein SKIP24 | 6.69e-02 | 3.05e-03 | NA |
2. P | A2BD94 | F-box only protein 31-B | 3.44e-01 | 2.91e-05 | NA |
2. P | Q84WW1 | F-box protein At3g12350 | 4.11e-01 | 2.73e-03 | NA |
2. P | O74951 | Uncharacterized protein C736.02 | 1.11e-02 | 6.41e-03 | NA |
2. P | Q3TQF0 | F-box only protein 31 | 4.56e-01 | 1.08e-03 | NA |
2. P | Q9XIN8 | F-box protein At2g27310 | 3.17e-01 | 6.59e-05 | NA |
2. P | Q05947 | F-box protein UCC1 | 5.24e-01 | 8.10e-06 | NA |
2. P | O10362 | Late expression factor 7 | NA | 9.93e-03 | NA |
2. P | Q5UPK2 | Putative F-box protein L126 | NA | 6.75e-04 | NA |
2. P | Q0D2D2 | F-box only protein 31 | 2.20e-01 | 3.76e-04 | NA |
2. P | Q9FL82 | F-box protein At5g39250 | 5.57e-01 | 9.82e-04 | NA |
2. P | Q8NCQ5 | F-box only protein 15 | 4.47e-01 | 2.93e-04 | NA |
2. P | Q9GKV7 | F-box only protein 15 | 2.01e-01 | 1.86e-02 | NA |
2. P | Q5XUX0 | F-box only protein 31 | 2.30e-01 | 9.47e-03 | NA |
2. P | Q5UPK8 | Putative F-box protein L127 | NA | 2.00e-02 | NA |
2. P | P52463 | Packaging protein UL32 | NA | 8.46e-03 | NA |
2. P | Q3SYW0 | F-box only protein 15 | 1.49e-01 | 2.31e-05 | NA |
2. P | Q9LF38 | EID1-like F-box protein 1 | 4.83e-01 | 3.81e-03 | NA |
2. P | Q6P050 | F-box and leucine-rich protein 22 | 1.04e-01 | 8.87e-03 | NA |
2. P | A2RRT3 | F-box only protein 31-A | 1.86e-01 | 3.33e-03 | NA |