Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 3. B was
Q3UZ57
(Axonemal dynein light chain domain-containing protein 1) with a FATCAT P-Value: 5.29e-12 and RMSD of 2.70 angstrom. The sequence alignment identity is 29.1%.
Structural alignment shown in left. Query protein Q5T1B0 colored as red in alignment, homolog Q3UZ57 colored as blue.
Query protein Q5T1B0 is also shown in right top, homolog Q3UZ57 showed in right bottom. They are colored based on secondary structures.
Q5T1B0 MSLPKTPSTPLNSTSTSESKKLKVSVAKEGTRGLPELKEKKNMVDRSKLLPTSLQNEFIPKEVLLSLTYAANAGPCPENLLPPKKIKTPKGTLPRLVDHV 100 Q3UZ57 ---------------------------------------------------------------------------------------------------- 0 Q5T1B0 WHHPVRRNKFKYLIDHPVSLTGAGRDISFLYDVTYAKGQTREKAVCPPHLARSLQSHDGVIVPHKPKTLTDTLIPEEFHIVSSTGVSGLECYDDKYTTLL 200 Q3UZ57 ---------------------------------------------------------------------------------------------------- 0 Q5T1B0 TDSENRLLLFPSMKPNKRVEVAQLNDVMDTMLERAGVENQEYTGPTKMHKLLHILKKEQTIYNMIFHELIRQVSVDCADRGELLSKVRERYVQMLDQIAR 300 Q3UZ57 ------------MKPNKRVEVVQLSNVMDTMLERAGIENENYVGPTKMHQLLNVLKREQSIYNTVFHELIRQVSVDCADRGELLSKIREKYVQMLDHIAQ 88 Q5T1B0 QMIDFYKDLVTQRVMDQRILEELYNFKHVIEELTRELCLVRAHDVKLTKETEKAHKDLAQALLNAEKNAKIVEEYHDLYTLQRERMENDMKKLVAERDIW 400 Q3UZ57 QMIEFYKDLVTQRMMDQRILQELYNFKNVIEELTRELCLVQAHDRKLTKEAEKVQKNLAEALLEAEKNAKIVEDYHDLYTMQRGRMESDIKLLMTERDIW 188 Q5T1B0 SSATYELALKVIERNRVILARRLYLNEKGWNKYTKHFIILLSNKDTEDLALLQKLTQKWRNLVNKLKQEVEQMEESTSETLKIVKDGLIKWQEFFNE--- 497 Q3UZ57 SSATYELAL----------------------------------KDTGDLGMVEKLTEKWKKLVNKFKQDVERTEESTKEKSEIVKAGIIKWQEFFNNNLG 254 Q5T1B0 KDILSPNKGNIFNSVLL-DFKQWQKILNEKKEEFTGDVLLSKYDTLKIIKHLQENWADIGLGIFNRHKSLEGEMPSERQYMEEIIKNIQKLYKEYEIRIN 596 Q3UZ57 KDVIIPSKRSPF-AVALNDFKEYEKMLEEEKEKFTGDFLLSRYDALKVIKRLQENWTDIGFGILSRHKSMDGLLPPEHEYMEDIVKIISKLYREYEIRIN 353 Q5T1B0 GDNGYSKILPSLISSLDFCSFKLEN-LEFPDTPLEEWQEIDEKINEMKSHLDILLNLTGIVPQHIDVDSVSVLQAYIFNMIQQWLLKIGNEINNGNIELQ 695 Q3UZ57 GDNGISKVLPNLVISLDMCVFKLENFLDYSQVPTEEWLEIDEKINEMKFHLEALLNIIDSVPEGMDMEPGA----------------------------- 424 Q5T1B0 HHMDELHISMIQWMVNLLILMIPNFTDQDCLLKLEEESAEKHDIGVARLELDAIELTRKLYQYSSYLSSCCKGMVTAMALSKSTNSHKNATEDLYEVDKL 795 Q3UZ57 ---------------------------------------------------------------------------------------------------- 424 Q5T1B0 KKECYEWINTCSCLLSNIKGRKITLLTYEEIERLLEEEAVKEFIEPEIDESFKEDEEESKEDRKLQEENKERAEEQPSTSTEKEKLIRFIGEDENVHSKP 895 Q3UZ57 ---------------------------------------------------------------------------------------------------- 424 Q5T1B0 LFETDVLSSWRESAKQGTLAQKYLEAMAVIEHMQEKLLEVENRARQAEEKFEDAYEKLHHTLIKNKDLEELVMTSRKESKEEKENQDEREVKEEEEQQEE 995 Q3UZ57 ---------------------------------------------------------------------------------------------------- 424 Q5T1B0 EEVRSAENSSKSPKKGH 1012 Q3UZ57 ----------------- 424
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
1. PB | GO:0005929 | cilium |
1. PB | GO:0005930 | axoneme |
1. PB | GO:0031514 | motile cilium |
2. P | GO:0031594 | neuromuscular junction |
2. P | GO:0005774 | vacuolar membrane |
2. P | GO:0016010 | dystrophin-associated glycoprotein complex |
2. P | GO:0030659 | cytoplasmic vesicle membrane |
2. P | GO:0060170 | ciliary membrane |
2. P | GO:0098797 | plasma membrane protein complex |
2. P | GO:0007474 | imaginal disc-derived wing vein specification |
2. P | GO:0051216 | cartilage development |
2. P | GO:0070286 | axonemal dynein complex assembly |
2. P | GO:0008307 | structural constituent of muscle |
2. P | GO:0046716 | muscle cell cellular homeostasis |
2. P | GO:0030010 | establishment of cell polarity |
2. P | GO:0001501 | skeletal system development |
2. P | GO:0003416 | endochondral bone growth |
2. P | GO:0042383 | sarcolemma |
2. P | GO:0015031 | protein transport |
2. P | GO:0048172 | regulation of short-term neuronal synaptic plasticity |
2. P | GO:0007517 | muscle organ development |
2. P | GO:0036064 | ciliary basal body |
2. P | GO:0007224 | smoothened signaling pathway |
2. P | GO:0048790 | maintenance of presynaptic active zone structure |
2. P | GO:0007274 | neuromuscular synaptic transmission |
2. P | GO:0045880 | positive regulation of smoothened signaling pathway |
2. P | GO:0050699 | WW domain binding |
2. P | GO:0046928 | regulation of neurotransmitter secretion |
2. P | GO:0005938 | cell cortex |
2. P | GO:0008586 | imaginal disc-derived wing vein morphogenesis |
2. P | GO:0006914 | autophagy |
2. P | GO:0005858 | axonemal dynein complex |
3. B | GO:0036126 | sperm flagellum |
3. B | GO:0003341 | cilium movement |
3. B | GO:0030286 | dynein complex |
3. B | GO:0120293 | dynein axonemal particle |
3. B | GO:0036156 | inner dynein arm |
3. B | GO:0036159 | inner dynein arm assembly |
3. B | GO:0030175 | filopodium |
3. B | GO:0097729 | 9+2 motile cilium |
3. B | GO:0045504 | dynein heavy chain binding |
3. B | GO:0097546 | ciliary base |
3. B | GO:0060294 | cilium movement involved in cell motility |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q5T1B0 | Axonemal dynein light chain domain-containing protein 1 | 0 | 6.65e-168 | 0.0 |
1. PB | Q95LP5 | Axonemal dynein light chain domain-containing protein 1 | 4.82e-11 | 3.20e-35 | 0.0 |
2. P | Q4V7B5 | Coiled-coil domain-containing protein 105 | 2.61e-01 | 6.35e-03 | NA |
2. P | Q5IF00 | Autophagy-related protein 28 | 4.31e-03 | 4.88e-04 | NA |
2. P | P0DL09 | Dynein regulatory complex protein 1 | 5.13e-04 | 1.37e-02 | NA |
2. P | P57679 | Ellis-van Creveld syndrome protein | 1.25e-03 | 1.13e-02 | NA |
2. P | C4R159 | Autophagy-related protein 28 | 3.28e-03 | 4.88e-04 | NA |
2. P | Q9VDW3 | Dystrophin, isoform B | 9.58e-02 | 9.23e-03 | NA |
3. B | Q4FZV3 | Axonemal dynein light intermediate polypeptide 1 | 4.52e-03 | NA | 0.019 |
3. B | Q26630 | 33 kDa inner dynein arm light chain, axonemal | 5.25e-03 | NA | 0.008 |
3. B | Q4R3K5 | Axonemal dynein light intermediate polypeptide 1 | 9.95e-03 | NA | 0.017 |
3. B | Q9VGG6 | Putative inner dynein arm light chain, axonemal | 1.38e-02 | NA | 0.010 |
3. B | Q8BVN8 | Axonemal dynein light intermediate polypeptide 1 | 1.30e-02 | NA | 0.015 |
3. B | Q3UZ57 | Axonemal dynein light chain domain-containing protein 1 | 5.29e-12 | NA | 0.0 |
3. B | Q39604 | 28 kDa inner dynein arm light chain, axonemal | 1.28e-02 | NA | 0.012 |
3. B | O14645 | Axonemal dynein light intermediate polypeptide 1 | 6.63e-03 | NA | 0.017 |
3. B | Q6GN86 | Axonemal dynein light intermediate polypeptide 1 | 7.98e-03 | NA | 0.006 |