Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
P59021
(Down syndrome critical region protein 9) with a FATCAT P-Value: 0.0398 and RMSD of 3.13 angstrom. The sequence alignment identity is 26.1%.
Structural alignment shown in left. Query protein Q5T4H9 colored as red in alignment, homolog P59021 colored as blue.
Query protein Q5T4H9 is also shown in right top, homolog P59021 showed in right bottom. They are colored based on secondary structures.
Q5T4H9 MQSREPSGWRTAE-RRRGWRCRGVP-TPSGD-------RG---------PGAARPAA--RG-----GA---GETT--GQ----QRPLQV---PGASAAAA 63 P59021 ------MG-RICPVNSRARRLRARPGRPSGDSLPYHQLQGGAPRLWSPDPG--RPAAYRRAHVCDVTAPRWGSTSRQGEGAVLQRMLRRRAPPSWSRDHA 91 Q5T4H9 RTRLLR-WHH-RVPSPRATRSPGSIRRTSPCSGGPDRPERPECADACCYLLDP-FTLPLI----QDFFRGCAASDFDRRD 136 P59021 YSR--RGWENVALFLNRKRKQEGT-ENTSICC-------RPESALACGGNLSPQFLKKVIQIQTQELW------------ 149
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0000122 | negative regulation of transcription by RNA polymerase II |
2. P | GO:0006470 | protein dephosphorylation |
2. P | GO:0097677 | STAT family protein binding |
3. B | GO:0015920 | lipopolysaccharide transport |
3. B | GO:0043165 | Gram-negative-bacterium-type cell outer membrane assembly |
3. B | GO:0009279 | cell outer membrane |
3. B | GO:0010033 | response to organic substance |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q5T4H9 | Putative uncharacterized protein encoded by MIR1915-HG | 0 | 2.21e-164 | 2.06e-92 |
2. P | P0DP75 | Putative uncharacterized protein MED14OS | 5.10e-02 | 1.93e-04 | NA |
2. P | Q8N7S6 | Uncharacterized protein ARIH2OS | 6.44e-02 | 1.37e-02 | NA |
2. P | Q6XXX2 | Putative uncharacterized protein encoded by LINC00114 | 6.61e-01 | 1.41e-02 | NA |
2. P | P21601 | Uncharacterized protein IRL14 | NA | 2.63e-02 | NA |
2. P | P59021 | Down syndrome critical region protein 9 | 3.98e-02 | 1.97e-03 | NA |
2. P | Q8N9T2 | Putative uncharacterized protein CXorf42 | 1.36e-01 | 3.98e-03 | NA |
2. P | P34245 | Uncharacterized protein YKL097C | 7.14e-01 | 3.65e-02 | NA |
2. P | Q569G3 | Uncharacterized protein C5orf47 | 6.34e-02 | 3.84e-02 | NA |
2. P | B1ANY3 | Putative protein FAM220BP | 2.71e-01 | 4.32e-04 | NA |
2. P | Q01480 | Putative uncharacterized protein M2 (Fragment) | NA | 4.95e-02 | NA |
2. P | P03164 | Putative uncharacterized 15.3 kDa protein | NA | 2.13e-02 | NA |
2. P | P0C879 | Putative uncharacterized protein FLJ43185 | 4.32e-02 | 6.36e-05 | NA |
3. B | A5VXJ8 | LPS-assembly protein LptD | 9.14e-01 | NA | 0.018 |