Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
O15265
(Ataxin-7) with a FATCAT P-Value: 0.000461 and RMSD of 11.33 angstrom. The sequence alignment identity is 31.5%.
Structural alignment shown in left. Query protein Q5T6C5 colored as red in alignment, homolog O15265 colored as blue.
Query protein Q5T6C5 is also shown in right top, homolog O15265 showed in right bottom. They are colored based on secondary structures.
Q5T6C5 ------------------------------------------------------------------MAVRERAAAAMAAL-ERR-VPSLDDFAGQSWSSW 32 O15265 MSERAADDVRGEPRRAAAAAGGAAAAAARQQQQQQQQQQPPPPQPQRQQHPPPPPRRTRPEDGGPGAA--STSAAAMATVGERRPLPSPEVMLGQSWNLW 98 Q5T6C5 VERADLPAADGAELEESSKN-TKKLDAMTLIKEDMSIFGHCPAHDDFYLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYGRAPP---PPPA-----PA-S 122 O15265 VEASKLPGKDGTELDESFKEFGKNREVMGLCREDMPIFGFCPAHDDFYLVVCNDCNQVVKPQAFQSHYERRHSSSSK-----PPLAVPPTSVFSFFPSLS 193 Q5T6C5 SQKCHVVNG-----QGPACRA-PGSTK--TSSREKGQ--G-SR-------SR---GH--QPPEKTQKDNLCQP---GGLTKDSPGKPPMAPPS-----KE 191 O15265 KSKGGSASGSNRSSSGGVLSASSSSSKLLKSPKEKLQLRGNTRPMHPIQQSRVPHGRIMTPSVKVEK--I-HPKMDGTLLKSAVG--PTCPATVSSLVK- 287 Q5T6C5 PPGREN---I--EIIPSEGSSHWAEG--SPP--EKEP---SGTRLPPK-THRKMARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDF 278 O15265 -PGL-NCPSIPKPTLPSPGQILNGKGLPAPPTLEKKPEDNSNNR---KFLNKRLSEREFDPDIHCGVIDLDTKKPCTRSLTCKTHSLTQRRAVQGRRKRF 382 Q5T6C5 DVLVAELKANSRKGESPKEKSPGRKEQVLERP-SQELPSSVQVVAAVAAPSSTFSVRAKQTYPYCALP-RSR---AS-----SESELD-DEGPC----GG 363 O15265 DVLLAEHK-N---------KT--REKELIRHPDSQQPPQPLR--DPHPAPPRT-SQEPHQN-PHGVIPSESKPFVASKPKPHTPS-LPRPPG-CPAQQGG 464 Q5T6C5 DG--D-PGLF--PFPMPRGGTQASSEESEEEGTSDD-------LHPPPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRF-CSALSSMLERHLSTH 450 O15265 SAPIDPPPVHESPHP-PLPATEPASRLSSEEGEGDDKEESVEKL----DCHYSGHHPQPASFCTFGSRQIGRGYYVFDSRWNRLRC-ALNLMVEKHLNAQ 558 Q5T6C5 MWKKIPP---AAEP-----PAHLVNS-P--------L-SAPLSPSS---TGTC--P---RLP--GPTL--RPAC-----P-ASM-----------PPTKD 503 O15265 LWKKIPPVPSTTSPISTRIP-HRTNSVPTSQCGVSYLAAATVSTSPVLLSSTCISPNSKSVPAHGTTLNAQPAASGAMDPVCSMQSRQVSSSSSSPSTPS 657 Q5T6C5 NL--VPSYP-AGSP-------SV--------AAACSQA--ECMGGS---QAITSPLPANTPSPSFSKLPPSKASKSSKGKDGVEVEAPS-RKRKLS---- 575 O15265 GLSSVPSSPMSRKPQKLKSSKSLRPKESSGNSTNCQNASSSTSGGSGKKRKNSSPLLVHSSSSS------SSSSSSS---HSME----SFRKNCVAHSGP 744 Q5T6C5 PGPTTLKRT------CIL----------EPTGKGKPSGCRGLSAKTKTALSMGLN---GT--MGPRVKRAG--PLDCRGS-PHQLPTPVKASQLENRGAA 651 O15265 PYPSTVTSSHSIGLNCVTNKANAVNVRHDQSGRGPPTGSPAESIK-RMSV-M-VNSSDSTLSLGPFIHQSNELPVNSHGSFSHS-HTPL--DKL-----I 833 Q5T6C5 GHPAKALPTNCLSEEEVAKKRKNLATYCRPVK-AKHCQAGAPADVACSVRRKKPG--P-ALAFEEKCSTL--KSKAH- 722 O15265 GKKRKCSPSS--S--SI----NN--SSSKPTKVAK-----VPA-VN-NVHMKHTGTIPGAQGLMN--SSLLHQPKARP 892
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
1. PB | GO:0071819 | DUBm complex |
1. PB | GO:0046822 | regulation of nucleocytoplasmic transport |
1. PB | GO:0016578 | histone deubiquitination |
1. PB | GO:0046695 | SLIK (SAGA-like) complex |
1. PB | GO:0006406 | mRNA export from nucleus |
1. PB | GO:0016363 | nuclear matrix |
1. PB | GO:1905634 | regulation of protein localization to chromatin |
1. PB | GO:0016573 | histone acetylation |
1. PB | GO:0007026 | negative regulation of microtubule depolymerization |
1. PB | GO:0000124 | SAGA complex |
1. PB | GO:1904802 | RITS complex assembly |
1. PB | GO:0008047 | enzyme activator activity |
1. PB | GO:0045899 | positive regulation of RNA polymerase II transcription preinitiation complex assembly |
1. PB | GO:0015630 | microtubule cytoskeleton |
1. PB | GO:0005634 | nucleus |
1. PB | GO:0000226 | microtubule cytoskeleton organization |
1. PB | GO:0042326 | negative regulation of phosphorylation |
1. PB | GO:0006997 | nucleus organization |
1. PB | GO:0043569 | negative regulation of insulin-like growth factor receptor signaling pathway |
1. PB | GO:0034622 | |
2. P | GO:0010233 | phloem transport |
2. P | GO:0051015 | actin filament binding |
2. P | GO:2000280 | regulation of root development |
2. P | GO:0016409 | palmitoyltransferase activity |
2. P | GO:0010088 | phloem development |
2. P | GO:0005884 | actin filament |
2. P | GO:0005874 | microtubule |
2. P | GO:0018345 | protein palmitoylation |
2. P | GO:0015629 | actin cytoskeleton |
2. P | GO:0010588 | cotyledon vascular tissue pattern formation |
2. P | GO:0010923 | negative regulation of phosphatase activity |
2. P | GO:1905171 | positive regulation of protein localization to phagocytic vesicle |
2. P | GO:2000220 | regulation of pseudohyphal growth |
2. P | GO:0030036 | actin cytoskeleton organization |
2. P | GO:1903078 | positive regulation of protein localization to plasma membrane |
2. P | GO:0046330 | positive regulation of JNK cascade |
2. P | GO:0051865 | protein autoubiquitination |
2. P | GO:0031397 | negative regulation of protein ubiquitination |
2. P | GO:0019902 | phosphatase binding |
2. P | GO:0031930 | mitochondria-nucleus signaling pathway |
2. P | GO:0010187 | negative regulation of seed germination |
2. P | GO:0003779 | actin binding |
2. P | GO:0051764 | actin crosslink formation |
2. P | GO:0004864 | protein phosphatase inhibitor activity |
2. P | GO:0022622 | root system development |
2. P | GO:0046329 | negative regulation of JNK cascade |
2. P | GO:0008017 | microtubule binding |
2. P | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process |
2. P | GO:0008157 | protein phosphatase 1 binding |
2. P | GO:0008093 | cytoskeletal anchor activity |
2. P | GO:0062208 | positive regulation of pattern recognition receptor signaling pathway |
2. P | GO:0019706 | protein-cysteine S-palmitoyltransferase activity |
2. P | GO:0010150 | leaf senescence |
2. P | GO:0009867 | jasmonic acid mediated signaling pathway |
2. P | GO:0006808 | regulation of nitrogen utilization |
3. B | GO:0003713 | transcription coactivator activity |
3. B | GO:0010390 | histone monoubiquitination |
3. B | GO:0006325 | chromatin organization |
3. B | GO:0030374 | nuclear receptor coactivator activity |
3. B | GO:0045893 | positive regulation of transcription, DNA-templated |
3. B | GO:0006357 | regulation of transcription by RNA polymerase II |
3. B | GO:0005730 | nucleolus |
3. B | GO:0031048 | heterochromatin assembly by small RNA |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q5T6C5 | Ataxin-7-like protein 2 | 0 | 6.78e-141 | 0.0 |
1. PB | Q8R4I1 | Ataxin-7 | 6.74e-03 | 8.70e-15 | 2.22e-28 |
1. PB | Q9ULK2 | Ataxin-7-like protein 1 | 6.30e-04 | 1.05e-30 | 8.10e-45 |
1. PB | P53165 | SAGA-associated factor 73 | 1.49e-01 | 1.28e-03 | 1.95e-05 |
1. PB | O15265 | Ataxin-7 | 4.61e-04 | 8.80e-14 | 8.28e-28 |
2. P | Q9FU27 | Zinc finger CCCH domain-containing protein 2 | 5.94e-01 | 3.94e-03 | NA |
2. P | Q9ZWA1 | Zinc finger CCCH domain-containing protein 2 | 2.75e-01 | 2.32e-02 | NA |
2. P | P34072 | Negative regulator of RAS-cAMP pathway | 1.88e-01 | 1.16e-02 | NA |
2. P | E1BLT8 | Palmitoyltransferase ZDHHC5 | 6.47e-02 | 4.63e-02 | NA |
2. P | Q3UWW6 | GAS2-like protein 3 | 2.69e-01 | 1.61e-02 | NA |
2. P | Q9FKW2 | Zinc finger CCCH domain-containing protein 61 | 2.29e-01 | 2.84e-03 | NA |
2. P | Q9SS80 | Protein OCTOPUS | 1.55e-01 | 4.46e-02 | NA |
2. P | Q86XJ1 | GAS2-like protein 3 | 3.17e-01 | 2.55e-02 | NA |
2. P | Q8TEC5 | E3 ubiquitin-protein ligase SH3RF2 | 2.59e-01 | 4.59e-02 | NA |
3. B | A2AWT3 | Ataxin-7-like protein 3 | 2.11e-01 | NA | 0.020 |
3. B | Q3T136 | Ataxin-7-like protein 1 | 2.19e-01 | NA | 2.84e-29 |
3. B | P0DH68 | SCA7 domain-containing protein SELMODRAFT_431321 | 1.09e-01 | NA | 8.74e-05 |
3. B | Q9CZ05 | Ataxin-7-like protein 1 | 2.07e-01 | NA | 2.73e-29 |
3. B | O94397 | SAGA-associated factor 73 | 1.57e-01 | NA | 1.32e-04 |
3. B | Q14CW9 | Ataxin-7-like protein 3 | 4.46e-01 | NA | 0.021 |
3. B | P0DH66 | SCA7 domain-containing protein SELMODRAFT_439258 | 6.36e-02 | NA | 9.72e-05 |