Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
Q6DD09
(Calcium-binding and coiled-coil domain-containing protein 1-B) with a FATCAT P-Value: 4.57e-07 and RMSD of 8.28 angstrom. The sequence alignment identity is 21.4%.
Structural alignment shown in left. Query protein Q5VVM6 colored as red in alignment, homolog Q6DD09 colored as blue.
Query protein Q5VVM6 is also shown in right top, homolog Q6DD09 showed in right bottom. They are colored based on secondary structures.
Q5VVM6 MSQEKNEMFESEWSKEREREKQLASGLDTAEKALKVESEELQKSKSELICLYNEVHNLPGESESKDHFLIACDLLQRENSELETKVLKLSQEFAQLNHFT 100 Q6DD09 ---------------------------------------------------------------------------------MES-ISQLQPPMG-VN-F- 15 Q5VVM6 LGGKTAPSNLITSENT---C--KDP----ESNEP---ILETEIQS-RKEET--EELCP-KLGERKQKEIPEESVK-EGSF-PREGQKE------E--GSQ 174 Q6DD09 L--NIAPTYI---PNTKVECHYTTPFGMKRSTRDWIGIFKVDTSSIRDYETFVWAVPPESSGERS---VSHCSVQFQAYYLPRPGEQQYHFRYVDQYGSV 107 Q5VVM6 QNRDMKDEEKEQQLTM---KP-EEIVRLREELSHINQSLLQSQSSGDSSDDSGAQHPSSGEKLKYNQQGEVQQLHQNLHRLQILCNSAENELRYERGQNL 270 Q6DD09 --RGCSDA-----FVFGEPRPMEELVTLEDE---------------DSCMDMLLVVP----KATF--------L-QN--QLE-MAQQERNDLMRAR---L 166 Q5VVM6 DLKQHNSLLQEENIKIKIELKHAQQKLLDST-KMCSSLTAEYK-HCQQKIKELELEVLKHTQSIKSQNNLQEKL-VQEKSKVADAEEKILDLQRKLEHAH 367 Q6DD09 ALEEE-VILKE---K---RINHL-EATLETSEKSCFSL----KEQCQ----DL---VMREQLAIE-EQSL---LSCQE----AELRERILQLQGEI---- 235 Q5VVM6 KVCLTDTCISEK-QQLE--EKIKEATQNEAKV--KQQYQE--EQQKRKLLYQ-NVDELHRQVRTLQDKENLLEMTCSQQQSRIQQQE-ALLKQLENEKRK 458 Q6DD09 K--IMNKKMQEKDRELEGTVAIKLSLENK-KVVLKQHLAETTVEIKR---YQLQVDSLREKLRSTQD---ML--SASQQKALLMGEELAAISSI-RDRTI 323 Q5VVM6 YDEHVKS---NQELSEKLSKLQ-QEKEALREEYLRLLK-LLNVHVRNYNEKHHQQKVKLQKVKYRLTNEVEL-RDKRINQFEDEIGILQHKIEKEKAIQD 552 Q6DD09 SDLH-KSRLETADLAIKVSDLSVKYKEGMGQWWQE--KTALN-H--SMEAKRDQI-VNLKAEKLSLENSLQAERSQR--Q------ALQCKL-------- 400 Q5VVM6 QITAQNDTLLLEKRKLQEQVIEQEQLIHSNKWTISSIQS--RVLYMDKENKQLQENSLRLTQQIGFLERIIRSIHIRRGENLKEFPVPKWWHRGKLASLP 650 Q6DD09 ----NQET---DARQVQ---------LSENRRQLSELKSALKVAQMEK--QQLREE--R--Q--GIL-QYARSLE-ERLDKLAD----ELWKEDKM--L- 467 Q5VVM6 PTKKQKEIYSTEVFTSN--NAELQH---EDESVPEATEKWKHSEQMET-TISDILESEV-VNEILPLSNSSFSGKGLVESFASLQETEEIKSKEAMASSK 743 Q6DD09 ----MEEI--TDL---NPPTLPVDHSDSDDES-P-GDE--RVSQQLEACSL-D--EQDLTIN--LP-------G------FPC-----EL-YKVVI---N 527 Q5VVM6 SPEKSPENLVCS------QNSEAGYINVASLKETHGIQEQDQKSEL 783 Q6DD09 QP--AP--IACQLQPLPEDNSDSW---------------------- 547
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0034142 | toll-like receptor 4 signaling pathway |
2. P | GO:2000280 | regulation of root development |
2. P | GO:0030500 | regulation of bone mineralization |
2. P | GO:0097224 | sperm connecting piece |
2. P | GO:0030705 | cytoskeleton-dependent intracellular transport |
2. P | GO:0045141 | meiotic telomere clustering |
2. P | GO:1902410 | mitotic cytokinetic process |
2. P | GO:0003382 | epithelial cell morphogenesis |
2. P | GO:0050775 | positive regulation of dendrite morphogenesis |
2. P | GO:0071539 | protein localization to centrosome |
2. P | GO:0072660 | maintenance of protein location in plasma membrane |
2. P | GO:0050729 | positive regulation of inflammatory response |
2. P | GO:0030142 | COPI-coated Golgi to ER transport vesicle |
2. P | GO:0010375 | stomatal complex patterning |
2. P | GO:0051026 | chiasma assembly |
2. P | GO:0005819 | spindle |
2. P | GO:1903251 | multi-ciliated epithelial cell differentiation |
2. P | GO:0035024 | negative regulation of Rho protein signal transduction |
2. P | GO:2000146 | negative regulation of cell motility |
2. P | GO:0044615 | nuclear pore nuclear basket |
2. P | GO:0000022 | mitotic spindle elongation |
2. P | GO:0007131 | reciprocal meiotic recombination |
2. P | GO:0034398 | telomere tethering at nuclear periphery |
2. P | GO:0031122 | cytoplasmic microtubule organization |
2. P | GO:0034451 | centriolar satellite |
2. P | GO:1903861 | positive regulation of dendrite extension |
2. P | GO:0003690 | double-stranded DNA binding |
2. P | GO:1903003 | positive regulation of protein deubiquitination |
2. P | GO:0005092 | GDP-dissociation inhibitor activity |
2. P | GO:0010497 | plasmodesmata-mediated intercellular transport |
2. P | GO:0085032 | modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade |
2. P | GO:1902254 | negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator |
2. P | GO:0000280 | nuclear division |
2. P | GO:0035630 | bone mineralization involved in bone maturation |
2. P | GO:0009101 | glycoprotein biosynthetic process |
2. P | GO:0051224 | negative regulation of protein transport |
2. P | GO:0030032 | lamellipodium assembly |
2. P | GO:0035092 | sperm DNA condensation |
2. P | GO:0008406 | gonad development |
2. P | GO:0007030 | Golgi organization |
2. P | GO:0000972 | transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery |
2. P | GO:0007099 | centriole replication |
2. P | GO:0031593 | polyubiquitin modification-dependent protein binding |
2. P | GO:0036064 | ciliary basal body |
2. P | GO:0031682 | G-protein gamma-subunit binding |
2. P | GO:0008017 | microtubule binding |
2. P | GO:0005929 | cilium |
2. P | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport |
2. P | GO:0120103 | centriolar subdistal appendage |
2. P | GO:0140297 | DNA-binding transcription factor binding |
2. P | GO:0045742 | positive regulation of epidermal growth factor receptor signaling pathway |
2. P | GO:0006997 | nucleus organization |
2. P | GO:1901214 | regulation of neuron death |
2. P | GO:0043422 | protein kinase B binding |
2. P | GO:0098535 | de novo centriole assembly involved in multi-ciliated epithelial cell differentiation |
2. P | GO:0001673 | male germ cell nucleus |
2. P | GO:1903566 | positive regulation of protein localization to cilium |
2. P | GO:0051019 | mitogen-activated protein kinase binding |
2. P | GO:0006954 | inflammatory response |
2. P | GO:1905349 | ciliary transition zone assembly |
2. P | GO:0000711 | meiotic DNA repair synthesis |
2. P | GO:0070373 | negative regulation of ERK1 and ERK2 cascade |
2. P | GO:0043622 | cortical microtubule organization |
2. P | GO:0005815 | microtubule organizing center |
2. P | GO:0051301 | cell division |
2. P | GO:0051289 | protein homotetramerization |
2. P | GO:0002756 | MyD88-independent toll-like receptor signaling pathway |
2. P | GO:0000775 | chromosome, centromeric region |
2. P | GO:0032695 | negative regulation of interleukin-12 production |
2. P | GO:0098536 | deuterosome |
2. P | GO:0005158 | insulin receptor binding |
2. P | GO:0005136 | interleukin-4 receptor binding |
2. P | GO:0031393 | negative regulation of prostaglandin biosynthetic process |
2. P | GO:0005828 | kinetochore microtubule |
2. P | GO:0000802 | transverse filament |
2. P | GO:1902584 | positive regulation of response to water deprivation |
2. P | GO:0005814 | centriole |
2. P | GO:0042976 | activation of Janus kinase activity |
2. P | GO:0030466 | silent mating-type cassette heterochromatin assembly |
2. P | GO:0032880 | regulation of protein localization |
2. P | GO:0007159 | leukocyte cell-cell adhesion |
2. P | GO:0051959 | dynein light intermediate chain binding |
2. P | GO:1903445 | protein transport from ciliary membrane to plasma membrane |
2. P | GO:0007283 | spermatogenesis |
2. P | GO:1901925 | negative regulation of protein import into nucleus during spindle assembly checkpoint |
2. P | GO:0051878 | lateral element assembly |
2. P | GO:0000922 | spindle pole |
2. P | GO:0000003 | reproduction |
2. P | GO:0042532 | negative regulation of tyrosine phosphorylation of STAT protein |
2. P | GO:0000800 | lateral element |
2. P | GO:1904491 | protein localization to ciliary transition zone |
2. P | GO:0007129 | homologous chromosome pairing at meiosis |
2. P | GO:0060271 | cilium assembly |
2. P | GO:0003009 | skeletal muscle contraction |
2. P | GO:0043184 | vascular endothelial growth factor receptor 2 binding |
2. P | GO:0002755 | MyD88-dependent toll-like receptor signaling pathway |
2. P | GO:0031929 | TOR signaling |
2. P | GO:0005813 | centrosome |
2. P | GO:0032815 | negative regulation of natural killer cell activation |
2. P | GO:0005652 | nuclear lamina |
2. P | GO:0008104 | protein localization |
2. P | GO:0040001 | establishment of mitotic spindle localization |
2. P | GO:0030030 | cell projection organization |
2. P | GO:0051300 | spindle pole body organization |
2. P | GO:0000795 | synaptonemal complex |
2. P | GO:0005694 | chromosome |
2. P | GO:0051296 | establishment of meiotic spindle orientation |
2. P | GO:0051493 | regulation of cytoskeleton organization |
2. P | GO:0051299 | centrosome separation |
2. P | GO:0051298 | centrosome duplication |
2. P | GO:0007130 | synaptonemal complex assembly |
2. P | GO:0042770 | signal transduction in response to DNA damage |
2. P | GO:1902017 | regulation of cilium assembly |
2. P | GO:0000776 | kinetochore |
2. P | GO:0000801 | central element |
2. P | GO:0003391 | amphid sensory organ dendrite retrograde extension |
2. P | GO:0000077 | DNA damage checkpoint signaling |
2. P | GO:0045724 | positive regulation of cilium assembly |
2. P | GO:0043124 | negative regulation of I-kappaB kinase/NF-kappaB signaling |
2. P | GO:0019905 | syntaxin binding |
2. P | GO:0040016 | embryonic cleavage |
2. P | GO:0000973 | posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery |
2. P | GO:0051225 | spindle assembly |
2. P | GO:0010564 | regulation of cell cycle process |
3. B | GO:0031175 | neuron projection development |
3. B | GO:0007411 | axon guidance |
3. B | GO:0030334 | regulation of cell migration |
3. B | GO:0061304 | retinal blood vessel morphogenesis |
3. B | GO:0030155 | regulation of cell adhesion |
3. B | GO:0005911 | cell-cell junction |
3. B | GO:0048514 | blood vessel morphogenesis |
3. B | GO:0045995 | regulation of embryonic development |
3. B | GO:0060445 | branching involved in salivary gland morphogenesis |
3. B | GO:0031012 | extracellular matrix |
3. B | GO:0009888 | tissue development |
3. B | GO:0005608 | laminin-3 complex |
3. B | GO:0045198 | establishment of epithelial cell apical/basal polarity |
3. B | GO:0007166 | cell surface receptor signaling pathway |
3. B | GO:0062023 | collagen-containing extracellular matrix |
3. B | GO:0060041 | retina development in camera-type eye |
3. B | GO:0005201 | extracellular matrix structural constituent |
3. B | GO:0002011 | morphogenesis of an epithelial sheet |
3. B | GO:0005604 | basement membrane |
3. B | GO:0043256 | laminin complex |
3. B | GO:0043010 | camera-type eye development |
3. B | GO:0005102 | signaling receptor binding |
3. B | GO:0005606 | laminin-1 complex |
3. B | GO:0008022 | protein C-terminus binding |
3. B | GO:0043208 | glycosphingolipid binding |
3. B | GO:0060441 | epithelial tube branching involved in lung morphogenesis |
3. B | GO:0009887 | animal organ morphogenesis |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q5VVM6 | Coiled-coil domain-containing protein 30 | 0 | 2.92e-123 | 0.0 |
1. PB | Q8BVF4 | Coiled-coil domain-containing protein 30 | 2.63e-03 | 1.64e-14 | 1.73e-168 |
1. PB | Q8WP33 | Coiled-coil domain-containing protein 30 | 6.66e-04 | 2.24e-53 | 0.0 |
2. P | A6NI56 | Coiled-coil domain-containing protein 154 | 6.09e-06 | 2.14e-02 | NA |
2. P | Q7ZVT3 | Spindle assembly abnormal protein 6 homolog | 2.05e-03 | 7.79e-03 | NA |
2. P | P21249 | Major antigen | 4.40e-01 | 1.74e-02 | NA |
2. P | O61308 | 227 kDa spindle- and centromere-associated protein | 7.82e-03 | 4.77e-03 | NA |
2. P | Q3UPP8 | Centrosomal protein of 63 kDa | 1.01e-06 | 1.88e-02 | NA |
2. P | Q9NUQ3 | Gamma-taxilin | 6.03e-05 | 9.47e-05 | NA |
2. P | Q9DEX1 | Calcium-binding and coiled-coil domain-containing protein 1-A | 9.95e-05 | 1.74e-03 | NA |
2. P | A2IDD5 | Coiled-coil domain-containing protein 78 | 1.27e-02 | 6.77e-04 | NA |
2. P | Q62209 | Synaptonemal complex protein 1 | 7.18e-04 | 6.35e-03 | NA |
2. P | Q6UVJ0 | Spindle assembly abnormal protein 6 homolog | 3.55e-03 | 3.64e-03 | NA |
2. P | P32448 | Anti-silencing protein 2 | 1.02e-05 | 1.25e-02 | NA |
2. P | Q9LEZ4 | Protein MICROTUBULE BINDING PROTEIN 2C | 1.98e-02 | 2.43e-02 | NA |
2. P | Q6PGZ0 | Centrosomal protein of 63 kDa | 1.98e-06 | 4.32e-02 | NA |
2. P | Q6NRG6 | Spindle assembly abnormal protein 6 homolog | 1.03e-04 | 1.68e-04 | NA |
2. P | Q8BI22 | Centrosomal protein of 128 kDa | 2.64e-03 | 2.54e-06 | NA |
2. P | F3Y5P4 | Girdin homolog | 1.99e-04 | 2.74e-05 | NA |
2. P | A0PJT0 | RILP-like protein 1 | 2.33e-05 | 2.43e-02 | NA |
2. P | Q9PW73 | Cytoskeletal protein Sojo | 1.50e-02 | 2.93e-03 | NA |
2. P | Q6DFL0 | Coiled-coil domain-containing protein 102A | 2.00e-02 | 1.53e-03 | NA |
2. P | Q5SPX1 | Coiled-coil domain-containing protein 157 | 7.95e-05 | 1.38e-04 | NA |
2. P | Q60563 | Synaptonemal complex protein 1 (Fragment) | 3.74e-04 | 1.89e-04 | NA |
2. P | Q6ZU80 | Centrosomal protein of 128 kDa | 2.65e-04 | 1.58e-06 | NA |
2. P | Q2TBH8 | ZW10 interactor | 3.27e-04 | 3.91e-02 | NA |
2. P | Q8N137 | Centrobin | 1.95e-06 | 2.37e-02 | NA |
2. P | Q4R703 | Centrosomal protein of 63 kDa | 1.12e-04 | 1.02e-05 | NA |
2. P | A2BGD5 | Calcium-binding and coiled-coil domain-containing protein 1 | 1.88e-03 | 5.71e-06 | NA |
2. P | Q5M9N0 | Coiled-coil domain-containing protein 158 | 2.61e-02 | 1.55e-02 | NA |
2. P | Q8CB62 | Centrobin | 1.06e-05 | 1.39e-04 | NA |
2. P | Q4R6W3 | Testis-specific gene 10 protein | 4.75e-03 | 7.01e-03 | NA |
2. P | Q6DD09 | Calcium-binding and coiled-coil domain-containing protein 1-B | 4.57e-07 | 3.10e-03 | NA |
2. P | Q5ZMV2 | Spindle assembly abnormal protein 6 homolog | 1.16e-03 | 4.73e-03 | NA |
2. P | Q96KP6 | TNFAIP3-interacting protein 3 | 1.48e-05 | 3.75e-02 | NA |
2. P | Q84WU4 | Golgin candidate 3 | 1.57e-05 | 1.05e-03 | NA |
2. P | Q15431 | Synaptonemal complex protein 1 | 2.01e-03 | 1.79e-03 | NA |
2. P | Q7FAD5 | Synaptonemal complex protein ZEP1 | 5.12e-02 | 3.61e-04 | NA |
2. P | P40457 | Protein MLP2 | 2.14e-01 | 7.79e-03 | NA |
2. P | Q05D60 | Deuterosome assembly protein 1 | 5.15e-07 | 4.18e-02 | NA |
2. P | Q86Z20 | Coiled-coil domain-containing protein 125 | 3.70e-03 | 1.43e-02 | NA |
2. P | Q15025 | TNFAIP3-interacting protein 1 | 1.35e-05 | 2.22e-09 | NA |
2. P | Q9WVQ0 | Polyamine-modulated factor 1-binding protein 1 | 1.80e-06 | 1.91e-03 | NA |
2. P | Q9I969 | Beta-taxilin | 1.42e-05 | 3.27e-02 | NA |
2. P | Q8BHN1 | Gamma-taxilin | 4.62e-05 | 5.13e-03 | NA |
2. P | Q3V6T2 | Girdin | 1.48e-03 | 1.49e-02 | NA |
2. P | Q0JJ05 | Nuclear matrix constituent protein 1b | 9.05e-05 | 1.15e-02 | NA |
2. P | P45970 | Spindle apparatus protein lin-5 | 3.71e-03 | 1.00e-04 | NA |
2. P | Q17QG3 | RILP-like protein 1 | 2.12e-06 | 4.25e-02 | NA |
2. P | Q8VYU6 | Golgin candidate 4 | 4.53e-05 | 4.08e-05 | NA |
2. P | A4IFI1 | Coiled-coil domain-containing protein 157 | 3.36e-06 | 3.85e-03 | NA |
2. P | Q8WXW3 | Progesterone-induced-blocking factor 1 | 1.31e-05 | 1.79e-02 | NA |
2. P | Q9WUU8 | TNFAIP3-interacting protein 1 | 1.16e-04 | 2.80e-05 | NA |
2. P | Q96MT8 | Centrosomal protein of 63 kDa | 1.73e-04 | 3.97e-04 | NA |
2. P | Q8TBY8 | Polyamine-modulated factor 1-binding protein 1 | 6.19e-05 | 4.14e-03 | NA |
3. B | P19137 | Laminin subunit alpha-1 | NA | NA | 0.005 |