Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
A6QP92
(Trichohyalin-like protein 1) with a FATCAT P-Value: 0.0494 and RMSD of 19.52 angstrom. The sequence alignment identity is 22.4%.
Structural alignment shown in left. Query protein Q5VYM1 colored as red in alignment, homolog A6QP92 colored as blue.
Query protein Q5VYM1 is also shown in right top, homolog A6QP92 showed in right bottom. They are colored based on secondary structures.
Q5VYM1 MEWLLEDLLGAKGDMGLLWGQLTHALACRHCGS-SCFQSPGNLV-TLF--LF---VVWQIQRWWQLGRLRQLHPWCSGNMVQGKELPLLHRVAFLDHLC- 92 A6QP92 MPQLLRDIL------CVI--ETFHKYAREDAATLTCTELK-QLIQSEFEDIFQPCAIHAVER--NL-NLLNID--SNG-AISFDEF-VLAIFSFL-NVCY 83 Q5VYM1 -KQKSEVEEEGEE--EEEG-EDEASLDPLKPCSPTKEAPTGEQATPAPPQ-------PSCGSEGLLKAIGIPEQTV-MQPVSP-----SRSFPIFQILTS 175 A6QP92 LDTQSLLNSEPRQVSKPEGMPHDMGLQ-V-----TNE--T-DQWTEGTSQTQDKVVLPS-GTAS-STHLSLEERAVEHNRVDPQGHTTAHKLP---VETS 169 Q5VYM1 FPVRHKIASGNRQQQRKSQLFWGLPSLHSESLEAIFLSSGGPSPLKWSVCSSVFFNKLAFLPRSNLLLPQYHSSAQFSTH--G-AHTMEDLE-GMAPDPQ 271 A6QP92 ---EH---SDSKNQHLK-----G--DEQSQKVDQ-DVSATGDS--RTQRETS----K----PMA--------GSEQISSHTKGEGQNKEILQKG---D-- 232 Q5VYM1 LLPPPSSPSVS---------SL-LLH--L-----RP--FPVD-----HKGVLSGAEAP-TQSP---GTS-P----LEVLPGY-------ETHLETTGHKK 331 A6QP92 ILARKQSGTETGGRFGEQEGSLGILHSPLEETTQRPGGSSEDQEVAGEKGV-KG--HPKSQEPSVQGKDEPSSEHVD-LPKQAAARKPSQTQ-KSAAAKD 327 Q5VYM1 MPQAFEPPMPPPCQSPA----SLS---EPRKVS--PEGGLAI-SKDFWG-----TVGYREKPQASESSMPVPCPPLDSLP-ELQRESSLEDPSRYKPQWE 415 A6QP92 ESRTAETP-EPPIQEKEYETRDLSVQGENRNVSETPM--VRVERKGVRGPEVHQTVG--QK-QIEEKTQP---PALEE-PTEDKKYHELQESSKEK---- 413 Q5VYM1 CRENSGNLWAFESPVLDLNPELSGTSPECVPPASE---TPWKGMQSRENIWVPADPVSPPSL---PSVPLLESLVMGPQGVLSESKALWE--TM----GQ 503 A6QP92 ---NAGE----DSETHELNSE-GG---EQKDSESEGAISP--GEEARH-----AEEGTAEALVNSKNAPEAE----GTPGT-RER--IWELTTLENQSGE 488 Q5VYM1 KENLWASDSPDPVHSTPPTTLM-EPHRINPGECLATSE--ATWKDTEHSRNSSASRSPSLALSPPPALAPELLRVRSMGVLSDSEARCGDIQKTKNSWAS 600 A6QP92 KNKMTTK-----IHD----KLVKEDDGYQ-GE---GSEPVATQND-E--------RSP----ETPNSLTAE-----------D-----GD----SNSETS 542 Q5VYM1 KHPACNLPQDLHGASPLGVLSDSQSIVGEMEQKENCVPVFPG--RGSSPSSNSVSKSHVSEPIADQSNYKPDGEAVEQRKNHWATELPAPSSLSTPLPEP 698 A6QP92 ---------DLF------VQGDSQS------QT-N--P-FRGSVQGSD-SNNPETQKHLA--LSE-----------EKRVQE-AAVL----AVR---GE- 594 Q5VYM1 HIDLELVWRNVQQRE----VPQGPSPLAVDPL-HPVPQPPTLAEAVKIERT---HPGLPKGVTCP--GV-KAEAPLSQRWTVPELLTHPGIHAWQWSREL 787 A6QP92 --DEQVTEEHAQEHEGQGSATTGRGP-AVEPRGH----SDTQVFIVRDENTKSLEPGIP-G--APNAGITK---QLSVR-QLP---TKKD------SR-- 669 Q5VYM1 KLRLKKLRQSPASR--APGPSQSFCSSPILSSTIPDFWGLPSCPPQQIYPPNPCPHSSSCHPQEVQRTVPQPV---QS-SHCHHFQSSSQLQPQESGRAE 881 A6QP92 K-ELKD--QSPSTKKEEDG---------ALEAQ-EDL--VKSLDENNAVSQKTCP--ATLE-EETES--PQQLAGEQSLSTKEHDPSVS-----ESGLEE 744 Q5VYM1 QGSQRGEKMKGKMVSQVPSQGPCVHMEAGVDYLSPGPGEPSNSKVL----VS-GKRKDKASASSSAKKREHPRKPKAGDHRRGTARLGLSTVTGKNHPAQ 976 A6QP92 R-MQRDQEL-------------CL-VERGAEHSSP-LYEALQEKMLQQTNVTQGEHQNQAQTASVAS----P------EIRRNQSS---ASLT--NDSSD 813 Q5VYM1 A------RSLVEAPVSTF-PQRSQHRGQSSQHTALPQLLLPKASG-PQ-DQPEAGRRASDILTPRHCKHCPWAHMEKYLSFPTLKASLTRGLQKVLAKCL 1067 A6QP92 GLVFFIDRQALQKYIREFLPDEDP-TG--AQQISAPQALEDK-QGRPQREELEPQKEAS---APKQ---------------------------------- 872 Q5VYM1 DNHRPLPTKSSQ 1079 A6QP92 ------------ 872
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0007018 | microtubule-based movement |
2. P | GO:1903099 | positive regulation of CENP-A containing nucleosome assembly |
2. P | GO:0045860 | positive regulation of protein kinase activity |
2. P | GO:0010369 | chromocenter |
2. P | GO:0005815 | microtubule organizing center |
2. P | GO:0000775 | chromosome, centromeric region |
2. P | GO:0007080 | mitotic metaphase plate congression |
2. P | GO:0035458 | cellular response to interferon-beta |
2. P | GO:0051315 | attachment of mitotic spindle microtubules to kinetochore |
2. P | GO:0005654 | nucleoplasm |
2. P | GO:0005828 | kinetochore microtubule |
2. P | GO:0099607 | lateral attachment of mitotic spindle microtubules to kinetochore |
2. P | GO:0007079 | mitotic chromosome movement towards spindle pole |
2. P | GO:0030036 | actin cytoskeleton organization |
2. P | GO:0000278 | mitotic cell cycle |
2. P | GO:0030071 | regulation of mitotic metaphase/anaphase transition |
2. P | GO:0005854 | nascent polypeptide-associated complex |
2. P | GO:0043515 | kinetochore binding |
2. P | GO:0051310 | metaphase plate congression |
2. P | GO:0000779 | condensed chromosome, centromeric region |
2. P | GO:0008574 | plus-end-directed microtubule motor activity |
2. P | GO:0003777 | microtubule motor activity |
2. P | GO:0015630 | microtubule cytoskeleton |
2. P | GO:0006612 | protein targeting to membrane |
2. P | GO:0030496 | midbody |
2. P | GO:0002218 | activation of innate immune response |
2. P | GO:0007052 | mitotic spindle organization |
2. P | GO:0051382 | kinetochore assembly |
2. P | GO:0099606 | microtubule plus-end directed mitotic chromosome migration |
2. P | GO:0000776 | kinetochore |
2. P | GO:1990023 | mitotic spindle midzone |
2. P | GO:0051233 | spindle midzone |
2. P | GO:0005730 | nucleolus |
2. P | GO:0031941 | filamentous actin |
2. P | GO:0046914 | transition metal ion binding |
3. B | GO:0001669 | acrosomal vesicle |
3. B | GO:0030154 | cell differentiation |
3. B | GO:0003779 | actin binding |
3. B | GO:0043160 | acrosomal lumen |
3. B | GO:0002080 | acrosomal membrane |
3. B | GO:0007283 | spermatogenesis |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q5VYM1 | Uncharacterized protein C9orf131 | 0 | 3.10e-184 | 0.0 |
1. PB | Q3V0E1 | Uncharacterized protein C9orf131 homolog | 5.64e-03 | 9.18e-18 | 2.77e-167 |
2. P | F4KCE9 | Kinetochore-associated protein KNL-2 homolog | 5.84e-01 | 2.23e-03 | NA |
2. P | Q5SWP3 | NAC-alpha domain-containing protein 1 | 1.13e-01 | 4.00e-06 | NA |
2. P | A6QP92 | Trichohyalin-like protein 1 | 4.94e-02 | 4.36e-03 | NA |
2. P | Q96M43 | Neuroblastoma breakpoint family member 4 | 1.70e-01 | 1.89e-02 | NA |
2. P | A0A1B0GUW6 | Uncharacterized protein SPEM3 | 6.24e-02 | 1.56e-02 | NA |
2. P | P69281 | Protein W | NA | 8.91e-04 | NA |
2. P | Q8N3D4 | EH domain-binding protein 1-like protein 1 | 1.06e-01 | 2.03e-02 | NA |
2. P | Q02224 | Centromere-associated protein E | NA | 3.62e-02 | NA |
2. P | Q5SS00 | DBF4-type zinc finger-containing protein 2 homolog | 4.59e-01 | 2.82e-02 | NA |
2. P | Q3V3Q4 | Pyrin domain-containing protein 3 | 4.02e-01 | 4.41e-02 | NA |
2. P | P18593 | Protein VirD3 | 2.94e-01 | 7.90e-03 | NA |
2. P | A8NIX5 | Uncharacterized protein C2orf81 homolog | 4.02e-01 | 8.63e-07 | NA |
2. P | A5PL33 | Protein KRBA1 | 1.60e-01 | 3.95e-06 | NA |
2. P | Q5VWK0 | Neuroblastoma breakpoint family member 6 | 2.59e-01 | 1.73e-02 | NA |
2. P | P69288 | Protein W | NA | 4.06e-02 | NA |
2. P | P69286 | Protein W | NA | 2.85e-02 | NA |
2. P | P69285 | Protein W | NA | 1.70e-04 | NA |
2. P | P69283 | Protein W | NA | 8.21e-04 | NA |
2. P | P13463 | Protein VirD3 | 3.05e-01 | 7.81e-03 | NA |
3. B | B6VQA5 | Spermatogenesis-associated protein 31 | 1.53e-01 | NA | 0.045 |
3. B | Q6ZU69 | Protein FAM205A | 1.32e-01 | NA | 0.005 |
3. B | Q63HN1 | Putative protein FAM205B | 8.34e-01 | NA | 0.007 |