Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
P0C7W8
(Putative protein FAM90A13P) with a FATCAT P-Value: 9.16e-07 and RMSD of 5.60 angstrom. The sequence alignment identity is 91.8%.
Structural alignment shown in left. Query protein Q658T7 colored as red in alignment, homolog P0C7W8 colored as blue.
Query protein Q658T7 is also shown in right top, homolog P0C7W8 showed in right bottom. They are colored based on secondary structures.
Q658T7 MTARRDPKPGAKRLVRAQTLQKQRRAPVGPRAPPPDEEDPRLKCKNCRALGHTVRSTRCPMKCWKAALVPPTLGKKEGKENLKPWKPQVEANPGPLNKDK 100 P0C7W8 MMARRDPTSWAKRLVRAQTLQKQRRAPVGPRAPPPDEEDPRLKCKNCGAFGHTARSTRCPMKCWKAALVPATLGKKEGKENLKPWKPRGEANPGPLNKDK 100 Q658T7 GEKEERPRQQDPQRKALLHIFSGKPPEKLLPNRKGSTESSVFLRVASRPMPVHTTSKRPCVDPELADRSATEMSGRGSVLASLSPLRKASLRSSSSLGPK 200 P0C7W8 GEKEERPRQQDPQRKALLHMFSGKPPEKPLPNGKGSTEPSDYLRVASGPMPVHTTSKRPRLDPVLADRSATEMSGRGSVLASLSPLRKASLSSSSSLGPK 200 Q658T7 ERQTGAAADIPQPAVRHQGPEPLLVVKPTHSSREGGCREVPQAASKTHGLLQAVRPQAQDKRPAVT-QPGPPAATHSLGLGSNLSFRPGAKRPAQAPIQG 299 P0C7W8 ERQTGAAADMPQPAVRHQGREPLLVVKPTHSRPEGGCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRPAQAPIQA 300 Q658T7 CLNFPKKPRLGPFQIPESAIQGGELGALENLQPPPAATELGPSTSPQMGRRTPAQVPGVDRQPPHSRPCLPTAQACTMSHHPAASHDGAQPLRVLFRRLE 399 P0C7W8 CLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGRRTPAQVPSVDRQPPHSRPCLPTAQACTMSHHPAASHDGAQPLRVLFRRLE 400 Q658T7 NRRWSSSLLAAPSFHSPEKLGVFLAQSPHVSEKSEGPCVRVPPNVLYEDLQVSSSSEDSDSDLQ 463 P0C7W8 NGRWSSSLLAAPSFHSPEKPGAFLAQSPHVSEKSEAPCVRVPPSVLYEDLQVSSSSEDSDSDLE 464
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0001042 | RNA polymerase I core binding |
2. P | GO:1905168 | positive regulation of double-strand break repair via homologous recombination |
2. P | GO:0003682 | chromatin binding |
2. P | GO:0016973 | poly(A)+ mRNA export from nucleus |
2. P | GO:0009792 | embryo development ending in birth or egg hatching |
2. P | GO:0006334 | nucleosome assembly |
2. P | GO:0007051 | spindle organization |
2. P | GO:0006606 | protein import into nucleus |
2. P | GO:0005654 | nucleoplasm |
2. P | GO:0006974 | cellular response to DNA damage stimulus |
2. P | GO:1903863 | P granule assembly |
2. P | GO:0010212 | response to ionizing radiation |
2. P | GO:0042995 | cell projection |
2. P | GO:2001032 | regulation of double-strand break repair via nonhomologous end joining |
2. P | GO:0010847 | regulation of chromatin assembly |
2. P | GO:0007095 | mitotic G2 DNA damage checkpoint signaling |
2. P | GO:0071168 | protein localization to chromatin |
2. P | GO:0043486 | histone exchange |
2. P | GO:0003729 | mRNA binding |
2. P | GO:0045860 | positive regulation of protein kinase activity |
2. P | GO:0042393 | histone binding |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | A8MXJ8 | Putative protein FAM90A5P | 8.06e-05 | 5.77e-50 | 0.0 |
1. PB | P0C7W9 | Putative protein FAM90A14P | 1.06e-04 | 2.47e-53 | 0.0 |
1. PB | P0C7V4 | Putative protein FAM90A15P | 1.56e-05 | 5.08e-57 | 0.0 |
1. PB | P0C7W8 | Putative protein FAM90A13P | 9.16e-07 | 3.47e-55 | 0.0 |
1. PB | A6NIJ5 | Putative protein FAM90A20P | 1.06e-04 | 8.39e-42 | 0.0 |
1. PB | A6NNJ1 | Putative protein FAM90A9P | 1.39e-04 | 3.09e-43 | 0.0 |
1. PB | A6NE21 | Putative protein FAM90A18P/FAM90A19P | 1.68e-06 | 1.25e-43 | 0.0 |
1. PB | Q86YD7 | Protein FAM90A1 | 8.12e-06 | 1.65e-64 | 0.0 |
1. PB | A6NEW6 | Putative protein FAM90A16P/FAM90A17P | 6.20e-05 | 6.24e-50 | 0.0 |
1. PB | A6NJQ4 | Putative protein FAM90A8P | 1.89e-06 | 4.26e-47 | 0.0 |
1. PB | D6RGX4 | Putative protein FAM90A26 | 5.16e-05 | 5.76e-58 | 0.0 |
1. PB | A8MWA6 | Putative protein FAM90A22P | 1.88e-06 | 1.10e-53 | 0.0 |
1. PB | A8MXZ1 | Putative protein FAM90A23P | 5.45e-06 | 1.02e-56 | 0.0 |
1. PB | Q658T7 | Putative protein FAM90A2P | 0 | 1.07e-137 | 0.0 |
1. PB | P0C7X0 | Putative protein FAM90A24P | 1.47e-05 | 1.69e-54 | 0.0 |
1. PB | A8MX19 | Putative protein FAM90A12P | 4.85e-04 | 2.62e-52 | 0.0 |
1. PB | A6NNH2 | Protein FAM90A27P | 1.70e-02 | 9.37e-31 | 4.65e-38 |
1. PB | A6NDY2 | Putative protein FAM90A10P | 6.82e-06 | 5.13e-44 | 0.0 |
1. PB | A6NKC0 | Putative protein FAM90A7P | 7.80e-04 | 2.71e-46 | 0.0 |
2. P | Q3ZBG8 | MRN complex-interacting protein | 5.58e-02 | 4.55e-02 | NA |
2. P | Q5ZK13 | Centrosomal protein kizuna | 4.83e-01 | 3.50e-02 | NA |
2. P | Q6NZF1 | Zinc finger CCCH domain-containing protein 11A | 2.37e-01 | 1.30e-02 | NA |
2. P | D3YT16 | Enlarged germline granules protein 1 | 1.55e-01 | 4.39e-02 | NA |
2. P | O75152 | Zinc finger CCCH domain-containing protein 11A | 4.41e-01 | 1.46e-02 | NA |
2. P | Q5REG6 | Zinc finger CCCH domain-containing protein 11A | 3.98e-01 | 1.76e-02 | NA |
2. P | Q68D10 | Protein SPT2 homolog | 3.82e-01 | 2.34e-02 | NA |
2. P | Q8BXQ8 | Protein FAM53C | 1.58e-01 | 2.00e-02 | NA |
2. P | Q5ZJJ1 | Zinc finger CCCH domain-containing protein 11A | 3.77e-01 | 7.84e-03 | NA |
2. P | Q6NTE8 | MRN complex-interacting protein | 8.19e-02 | 2.14e-02 | NA |