Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
Q9Y6X4
(Soluble lamin-associated protein of 75 kDa) with a FATCAT P-Value: 0.0322 and RMSD of 4.71 angstrom. The sequence alignment identity is 21.8%.
Structural alignment shown in left. Query protein Q68DL7 colored as red in alignment, homolog Q9Y6X4 colored as blue.
Query protein Q68DL7 is also shown in right top, homolog Q9Y6X4 showed in right bottom. They are colored based on secondary structures.
Q68DL7 -----------------------MNDSR----QQ----SLFFITLP-DLNKLCAVRII---LSNKV------ADTEIRTIQMKMCRQLLFLHQDIL-TS- 57 Q9Y6X4 MAFPVDMLENCSHEELENSAEDYMSDLRCGDPENPECFSLLNITIPISLSNVGFVPLYGGDQTQKILALFAPEDS-LTAVALYLADQWWAID-DIVKTSV 98 Q68DL7 PVS--GILNQIWVVMA-IPFYKARKLNAYVEKYGAKMEAPQRVIPVILQNCLSYSFMARLAPAWNRTGHLLIQGRDFLSQMGKQSAVVLNINVTET-QVC 153 Q9Y6X4 P-SREG-LKQVSTLGERVVLY---VLNRII--Y-RKQEMERNEIPFL---CHSSTDYAKI--LWKK-GEAI--G--FYS-------------VKPTGSIC 167 Q68DL7 LSIEACTIRLPAPE---L------KEFEISQSIIKDFHANKHAVIERHSI-LSNWCYVLPSMKMGQIINIFHAIPAACP--FHSY-GDFQRHWDALYG-- 238 Q9Y6X4 ASFLTQSYQLPVLDTMFLRKKYRGKDFGL--HMLEDF---VDSFTE-DALGLR---YPLSSL-M------Y----TACKQYFEKYPGDHELLWE-VEGVG 246 Q68DL7 --Y-KLP------GDCGKI-KIYCNIYFK--MLGERTFTY-PLSC----IR-----SQPMQFFPRVDSEVVLK-SFLS-----DLKSKL-PHI-CG---F 305 Q9Y6X4 HWYQRIPVTRALQREALKILALSQN-EPKRPMSGE----YGPASVPEYEARTEDNQSSEMQL--TIDS---LKDAFASTSEGHD-KTSVSTHTRSGNLKR 335 Q68DL7 PIKMTSKPCYYTQELTKPNIQEHKVKPPNLTTKKMLRASLT--QATSRKPA-CAQSLL---PCSVAV---DHKVELSVSQPTSGIFSALHLQP--ESVQG 394 Q9Y6X4 P-KIGKR--FQDSEFSSSQGEDEK------TSQTSLTASINKLESTAR-PSESSEEFLEEEPEQRGIEFEDESSDRD-ARP------ALETQPQQEKQDG 418 Q68DL7 RKKS-L----------SIRAPQV------HSEV------LMPNRGNTQVQHTNL------SSQ-SNI-----TPKFVPVFKNRLLQMNKNTSVLGSPKRK 459 Q9Y6X4 EKESELEPMNGEIMDDSLKTSLITEEEDSTSEVLDEELKLQPF--NSSEDSTNLVPLVVESSKPPEVDAPDKTPR-IP--DSEML-MDEGTS-----DEK 507 Q68DL7 QHDVTQSKLFSLKTSMIQHDKLNLGPAIKNRYSSNI-QMQAANNLNQE----NS-------RPLQEKNTESSENMTKFPSSRGKSTVSLNKNKQLSNSAV 547 Q9Y6X4 GH--MEEKL-----SLLPRKKAHLG------SSDNVATM--SNEERSDGGFPNSVIAEFSEEPVSE-NL--SPNTTSSLEDQGEEGVS---EPQETSTA- 585 Q68DL7 FVVSNNNLGVVKSAVDFQMKGKENLTGKGITQILGKSHGSLKLKRQPHIFE-SDGETEDPRLLQQQSENQAKEVGTSDHRL-IVSKIAHRSKRKLCPESS 645 Q9Y6X4 --LPQSSL------IEVEL---EDVP---FSQNAGQ-------KNQSE--EQSEASSEQ---LDQFTQSAEKAVDSSSEEIEVEVPVVDR--RNL---RR 654 Q68DL7 KTSKKHHSDTVHYGQSSSSKKQILDSDKSKLKKSLIIHNA 685 Q9Y6X4 K-AKGHK------G---PAKK------KAKLT-------- 670
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:1990414 | replication-born double-strand break repair via sister chromatid exchange |
2. P | GO:0016032 | viral process |
2. P | GO:0034967 | Set3 complex |
2. P | GO:0000976 | transcription cis-regulatory region binding |
2. P | GO:0019076 | viral release from host cell |
2. P | GO:0016236 | macroautophagy |
2. P | GO:0000422 | autophagy of mitochondrion |
2. P | GO:0050821 | protein stabilization |
2. P | GO:0030430 | host cell cytoplasm |
2. P | GO:0060760 | positive regulation of response to cytokine stimulus |
2. P | GO:0070056 | prospore membrane leading edge |
2. P | GO:0034503 | protein localization to nucleolar rDNA repeats |
2. P | GO:0034244 | negative regulation of transcription elongation from RNA polymerase II promoter |
2. P | GO:0060963 | positive regulation of ribosomal protein gene transcription by RNA polymerase II |
2. P | GO:1990483 | Clr6 histone deacetylase complex I'' |
2. P | GO:0003713 | transcription coactivator activity |
2. P | GO:0043966 | histone H3 acetylation |
2. P | GO:1990619 | histone H3-K9 deacetylation |
2. P | GO:0034728 | nucleosome organization |
2. P | GO:0039708 | nuclear capsid assembly |
2. P | GO:0034727 | piecemeal microautophagy of the nucleus |
2. P | GO:0071211 | protein targeting to vacuole involved in autophagy |
2. P | GO:0006366 | transcription by RNA polymerase II |
2. P | GO:0032021 | NELF complex |
2. P | GO:0031507 | heterochromatin assembly |
2. P | GO:0019887 | protein kinase regulator activity |
2. P | GO:0035613 | RNA stem-loop binding |
2. P | GO:0120095 | vacuole-isolation membrane contact site |
2. P | GO:0051764 | actin crosslink formation |
2. P | GO:0000423 | mitophagy |
2. P | GO:0032435 | negative regulation of proteasomal ubiquitin-dependent protein catabolic process |
2. P | GO:0000226 | microtubule cytoskeleton organization |
2. P | GO:0071255 | Cvt vesicle assembly |
2. P | GO:0019033 | viral tegument |
2. P | GO:0019888 | protein phosphatase regulator activity |
2. P | GO:0030435 | sporulation resulting in formation of a cellular spore |
2. P | GO:0140297 | DNA-binding transcription factor binding |
2. P | GO:0008157 | protein phosphatase 1 binding |
2. P | GO:1902065 | response to L-glutamate |
2. P | GO:1902166 | negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator |
2. P | GO:0070742 | C2H2 zinc finger domain binding |
2. P | GO:0000045 | autophagosome assembly |
2. P | GO:0000785 | chromatin |
2. P | GO:0043066 | negative regulation of apoptotic process |
2. P | GO:0030914 | |
2. P | GO:0070210 | Rpd3L-Expanded complex |
2. P | GO:1990316 | Atg1/ULK1 kinase complex |
2. P | GO:0005669 | transcription factor TFIID complex |
2. P | GO:0033276 | transcription factor TFTC complex |
2. P | GO:0039695 | DNA-templated viral transcription |
2. P | GO:0000183 | rDNA heterochromatin assembly |
2. P | GO:1990877 | FNIP-folliculin RagC/D GAP |
2. P | GO:0070555 | response to interleukin-1 |
2. P | GO:0005884 | actin filament |
2. P | GO:0000125 | |
2. P | GO:0071339 | MLL1 complex |
2. P | GO:0006352 | DNA-templated transcription, initiation |
2. P | GO:0051455 | monopolar spindle attachment to meiosis I kinetochore |
2. P | GO:0030036 | actin cytoskeleton organization |
2. P | GO:0045665 | negative regulation of neuron differentiation |
2. P | GO:0019074 | viral RNA genome packaging |
2. P | GO:0033551 | monopolin complex |
2. P | GO:0000288 | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
2. P | GO:0070550 | rDNA condensation |
2. P | GO:0051117 | ATPase binding |
2. P | GO:0034497 | protein localization to phagophore assembly site |
2. P | GO:0051598 | meiotic recombination checkpoint signaling |
2. P | GO:0061435 | positive regulation of transcription from a mobile element promoter |
2. P | GO:0070064 | proline-rich region binding |
2. P | GO:0000800 | lateral element |
2. P | GO:0000124 | SAGA complex |
2. P | GO:0004252 | serine-type endopeptidase activity |
2. P | GO:0042025 | host cell nucleus |
2. P | GO:0005198 | structural molecule activity |
2. P | GO:0045747 | positive regulation of Notch signaling pathway |
2. P | GO:0070761 | pre-snoRNP complex |
2. P | GO:0098780 | response to mitochondrial depolarisation |
2. P | GO:0045143 | homologous chromosome segregation |
2. P | GO:0019898 | extrinsic component of membrane |
2. P | GO:0015630 | microtubule cytoskeleton |
2. P | GO:0000407 | phagophore assembly site |
2. P | GO:0003712 | transcription coregulator activity |
2. P | GO:0015031 | protein transport |
2. P | GO:0005637 | nuclear inner membrane |
2. P | GO:0002039 | p53 binding |
2. P | GO:0044805 | late nucleophagy |
2. P | GO:0000492 | box C/D snoRNP assembly |
2. P | GO:2000042 | negative regulation of double-strand break repair via homologous recombination |
2. P | GO:0043666 | regulation of phosphoprotein phosphatase activity |
2. P | GO:0045944 | positive regulation of transcription by RNA polymerase II |
2. P | GO:0051571 | positive regulation of histone H3-K4 methylation |
2. P | GO:0032147 | activation of protein kinase activity |
2. P | GO:0008093 | cytoskeletal anchor activity |
2. P | GO:0008656 | cysteine-type endopeptidase activator activity involved in apoptotic process |
2. P | GO:0042802 | identical protein binding |
2. P | GO:0044204 | host cell nuclear matrix |
2. P | GO:0000433 | carbon catabolite repression of transcription from RNA polymerase II promoter by glucose |
2. P | GO:0006914 | autophagy |
2. P | GO:0046982 | protein heterodimerization activity |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q68DL7 | Uncharacterized protein C18orf63 | 0 | 9.02e-132 | 0.0 |
2. P | P03203 | Epstein-Barr nuclear antigen 4 | NA | 2.07e-07 | NA |
2. P | Q9H706 | GRB2-associated and regulator of MAPK protein 1 | 2.95e-01 | 4.77e-02 | NA |
2. P | Q2ULT1 | Autophagy-related protein 13 | 7.68e-01 | 1.24e-04 | NA |
2. P | F5HCV3 | Putative transcription activator ORF50 | NA | 4.59e-03 | NA |
2. P | I1RW37 | Autophagy-related protein 13 | 1.32e-01 | 4.10e-03 | NA |
2. P | Q6FIU0 | GLC7-interacting protein 4 | 4.59e-02 | 2.35e-08 | NA |
2. P | Q6CXP4 | Protein LST4 | 7.20e-01 | 9.61e-03 | NA |
2. P | O36019 | Autophagy protein 13 | 1.47e-01 | 6.76e-04 | NA |
2. P | Q9QJ30 | Capsid scaffolding protein | NA | 1.17e-02 | NA |
2. P | P24433 | Capsid scaffolding protein | NA | 3.28e-03 | NA |
2. P | Q5BKE0 | Transcription initiation factor TFIID subunit 9 | 5.59e-01 | 9.27e-03 | NA |
2. P | Q10369 | Uncharacterized protein C22E12.19 | 4.69e-01 | 1.69e-02 | NA |
2. P | Q1PDD0 | Nucleoprotein | NA | 1.95e-02 | NA |
2. P | W0TA43 | Autophagy-related protein 13 | 2.01e-01 | 8.16e-03 | NA |
2. P | A2QWA6 | Autophagy-related protein 13 | 3.85e-01 | 1.25e-04 | NA |
2. P | Q9BXK5 | Bcl-2-like protein 13 | 1.52e-01 | 2.43e-02 | NA |
2. P | Q3KST2 | Epstein-Barr nuclear antigen 3 | NA | 1.28e-03 | NA |
2. P | Q6BQ20 | Autophagy-related protein 13 | 4.10e-01 | 1.14e-05 | NA |
2. P | Q8VI33 | Transcription initiation factor TFIID subunit 9 | 5.11e-01 | 6.27e-03 | NA |
2. P | Q5A1Z5 | Autophagy-related protein 13 | 3.44e-01 | 1.78e-02 | NA |
2. P | A5DQA8 | Autophagy-related protein 13 | 3.47e-01 | 6.76e-04 | NA |
2. P | Q9H3P2 | Negative elongation factor A | 7.96e-02 | 9.27e-03 | NA |
2. P | A6ZX59 | Autophagy-related protein 13 | 1.41e-01 | 2.72e-03 | NA |
2. P | Q18LF5 | Protein ORF A | NA | 9.40e-04 | NA |
2. P | Q1E891 | Autophagy-related protein 13 | 4.07e-01 | 1.08e-07 | NA |
2. P | Q5VYV7 | Protein SLX4IP | 2.46e-01 | 4.92e-09 | NA |
2. P | Q758N2 | Autophagy-related protein 13 | 1.58e-01 | 2.41e-03 | NA |
2. P | P34379 | Autophagy-related protein 13 homolog | 4.91e-01 | 3.04e-02 | NA |
2. P | Q6CLJ6 | GLC7-interacting protein 4 | 4.62e-01 | 1.73e-02 | NA |
2. P | A7TTE2 | Autophagy-related protein 13 | 4.34e-01 | 3.96e-03 | NA |
2. P | Q759B7 | GLC7-interacting protein 4 | 7.48e-01 | 2.07e-06 | NA |
2. P | P12977 | Epstein-Barr nuclear antigen 3 | NA | 4.12e-02 | NA |
2. P | Q9EQ10 | PCNA-interacting partner | 2.26e-01 | 3.65e-04 | NA |
2. P | Q17QQ4 | Transcription initiation factor TFIID subunit 9 | 5.53e-01 | 1.23e-03 | NA |
2. P | Q9Y6X4 | Soluble lamin-associated protein of 75 kDa | 3.22e-02 | 4.20e-05 | NA |
2. P | Q9E6P2 | Capsid scaffolding protein | NA | 4.18e-03 | NA |
2. P | Q16594 | Transcription initiation factor TFIID subunit 9 | 4.10e-01 | 3.40e-04 | NA |
2. P | Q5BBK4 | Autophagy-related protein 13 | 2.53e-01 | 1.32e-02 | NA |
2. P | A0A0D1E9B9 | Spore development regulator umv1 | 1.60e-01 | 1.43e-02 | NA |
2. P | Q283Q6 | Protein DBF4 homolog B | 4.32e-01 | 3.98e-02 | NA |
2. P | P14291 | Protein RED1 | 2.69e-01 | 2.11e-03 | NA |
2. P | Q1HVG4 | Epstein-Barr nuclear antigen 4 | NA | 1.36e-06 | NA |
2. P | Q23523 | Mediator of RNA polymerase II transcription subunit 4 | 3.31e-01 | 1.05e-02 | NA |
2. P | Q01012 | Putative transcription activator BRLF1 homolog | NA | 1.75e-06 | NA |
2. P | Q3KST4 | Envelope glycoprotein GP350 | NA | 2.26e-02 | NA |
2. P | A7F7B2 | Autophagy-related protein 13 | 2.15e-01 | 6.44e-04 | NA |
2. P | P52519 | Large structural phosphoprotein | NA | 6.02e-07 | NA |
2. P | Q0UPX4 | Autophagy-related protein 13 | 5.45e-01 | 1.73e-02 | NA |
2. P | P89449 | Capsid scaffolding protein | NA | 4.19e-04 | NA |
2. P | Q08118 | Uncharacterized protein IRC10 | 6.26e-01 | 4.85e-04 | NA |
2. P | O45962 | Regulation of longevity by E3 ubiquitin-protein ligase | 2.33e-01 | 5.46e-03 | NA |
2. P | F4J8V5 | Autophagy-related protein 13b | 1.77e-01 | 1.05e-02 | NA |
2. P | Q5ZKL9 | PCNA-interacting partner | 2.23e-01 | 1.49e-02 | NA |
2. P | Q90186 | Non-structural protein NS2 | NA | 3.18e-02 | NA |
2. P | Q5A2B9 | Transcription factor SPT20 | 6.29e-01 | 2.26e-02 | NA |
2. P | P29548 | Telomere-binding protein subunit beta | 3.55e-01 | 4.18e-03 | NA |
2. P | Q9H869 | YY1-associated protein 1 | 1.78e-01 | 5.01e-05 | NA |
2. P | Q86XJ1 | GAS2-like protein 3 | 3.15e-01 | 1.68e-05 | NA |
2. P | P68343 | Envelope glycoprotein GP350 | NA | 5.82e-03 | NA |
2. P | Q4WHN5 | Autophagy-related protein 13 | 5.18e-01 | 4.94e-03 | NA |
2. P | Q66652 | Putative transcription activator BRLF1 homolog | NA | 6.54e-09 | NA |
2. P | A7KAM4 | Autophagy-related protein 13 | 6.57e-01 | 1.11e-05 | NA |
2. P | P16046 | Capsid scaffolding protein | NA | 4.81e-02 | NA |
2. P | P0C7V6 | Putative transcription factor SPT20 homolog-like 2 | 2.77e-01 | 3.59e-02 | NA |
2. P | Q3UWW6 | GAS2-like protein 3 | 4.61e-02 | 1.50e-05 | NA |
2. P | Q3KST1 | Epstein-Barr nuclear antigen 4 | NA | 1.38e-07 | NA |
2. P | Q3ZLR7 | Transcription factor SPT20 homolog-like 1 | 9.67e-02 | 2.58e-02 | NA |
2. P | P39732 | GLC7-interacting protein 4 | 2.31e-01 | 1.01e-04 | NA |
2. P | P30005 | 120 kDa Glycoprotein O | NA | 2.97e-02 | NA |
2. P | Q8R2U2 | Nucleolus and neural progenitor protein | 5.08e-01 | 9.58e-04 | NA |
2. P | Q6IRT3 | PCNA-interacting partner | 2.43e-01 | 7.45e-03 | NA |
2. P | Q00041 | Tegument protein UL46 homolog | NA | 2.97e-02 | NA |
2. P | Q9P7I7 | Uncharacterized protein C24B10.19c | 8.89e-01 | 2.11e-03 | NA |
2. P | Q69535 | Large structural phosphoprotein | NA | 2.74e-05 | NA |
2. P | Q04087 | Monopolin complex subunit LRS4 | 4.57e-01 | 9.02e-03 | NA |
2. P | Q00701 | Large structural phosphoprotein | NA | 1.79e-06 | NA |
2. P | A7KAJ8 | Autophagy-related protein 13 | 1.09e-01 | 1.96e-02 | NA |
2. P | Q08DY8 | Autophagy-related protein 13 | 4.94e-01 | 3.50e-02 | NA |
2. P | Q6CWK2 | Autophagy-related protein 13 | 1.06e-01 | 4.89e-03 | NA |
2. P | Q06628 | Autophagy-related protein 13 | 8.71e-02 | 2.46e-03 | NA |
2. P | Q6UDK6 | Capsid scaffolding protein | NA | 1.46e-02 | NA |
2. P | Q3KSP9 | Capsid scaffolding protein | NA | 2.46e-03 | NA |
2. P | Q69138 | Epstein-Barr nuclear antigen 3 | NA | 9.31e-04 | NA |
2. P | Q4V3C1 | Mediator of RNA polymerase II transcription subunit 8 | 3.74e-01 | 2.51e-02 | NA |
2. P | P07261 | Glycolytic genes transcriptional activator GCR1 | 3.79e-01 | 4.46e-02 | NA |
2. P | Q6FSJ9 | Autophagy-related protein 13 | 8.94e-02 | 1.59e-02 | NA |
2. P | P03234 | Capsid scaffolding protein | NA | 3.22e-03 | NA |
2. P | Q5HYC2 | Uncharacterized protein KIAA2026 | 6.27e-01 | 8.39e-05 | NA |
2. P | Q02479 | Putative transcription activator BRLF1 homolog | NA | 2.67e-03 | NA |
2. P | P68344 | Envelope glycoprotein GP340 | NA | 5.82e-03 | NA |
2. P | Q1HVC7 | Capsid scaffolding protein | NA | 4.34e-03 | NA |
2. P | A4IGL8 | Protein SLX4IP | 2.01e-01 | 7.12e-03 | NA |
2. P | Q5XG69 | Soluble lamin-associated protein of 75 kDa | 1.21e-01 | 5.00e-04 | NA |
2. P | Q6NW34 | Nucleolus and neural progenitor protein | 6.29e-01 | 4.31e-04 | NA |