Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
Q9LUA3
(Protein NIM1-INTERACTING 2) with a FATCAT P-Value: 0.0479 and RMSD of 3.32 angstrom. The sequence alignment identity is 22.6%.
Structural alignment shown in left. Query protein Q6X4T0 colored as red in alignment, homolog Q9LUA3 colored as blue.
Query protein Q6X4T0 is also shown in right top, homolog Q9LUA3 showed in right bottom. They are colored based on secondary structures.
Q6X4T0 MAQHPCQDQEQKVEM-TSKQ--QR---STSIEETMRPQEKQVTITETLWD---QVL--------TVFK---DI-QKELQEDARIR----GMSN---CSMT 72 Q9LUA3 M-NNSLK-KEERVEEDNGKSDGNRGKPST---EVVR------TVTEEEVDEFFKILRRVHVATRTVAKVNGGVAEGELPSKKRKRSQNLGLRNSLDCN-- 87 Q6X4T0 PMTSAPRTGSIRPPDSLMTPKLRRLQFSSGEQPSG-GRIH-NLKTQLFSQSAYYPGP------- 127 Q9LUA3 --------G-VR--DGEF-DEINRV----GLQ--GLG-LDLNCK----------PEPDSVSLSL 122
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0042025 | host cell nucleus |
2. P | GO:0019911 | structural constituent of myelin sheath |
2. P | GO:0010112 | regulation of systemic acquired resistance |
2. P | GO:0039526 | modulation by virus of host apoptotic process |
2. P | GO:0043209 | myelin sheath |
2. P | GO:0039545 | suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity |
2. P | GO:0044192 | host cell mitochondrial inner membrane |
2. P | GO:0044164 | host cell cytosol |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q6X4T0 | Uncharacterized protein C12orf54 | 0 | 1.62e-141 | 2.40e-91 |
2. P | Q9LUA3 | Protein NIM1-INTERACTING 2 | 4.79e-02 | 2.24e-03 | NA |
2. P | P58512 | Uncharacterized protein encoded by LINC01547 | 3.69e-01 | 3.52e-02 | NA |
2. P | Q20PL5 | Protein PB1-F2 | NA | 2.37e-02 | NA |
2. P | P98190 | Myelin basic protein (Fragments) | 6.09e-01 | 7.07e-03 | NA |
3. B | Q3SZX7 | Uncharacterized protein C12orf54 homolog | 3.55e-06 | NA | 3.87e-40 |