Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
Q5R6R8
(Paraneoplastic antigen-like protein 8A) with a FATCAT P-Value: 1.23e-11 and RMSD of 3.89 angstrom. The sequence alignment identity is 96.8%.
Structural alignment shown in left. Query protein Q86V59 colored as red in alignment, homolog Q5R6R8 colored as blue.
Query protein Q86V59 is also shown in right top, homolog Q5R6R8 showed in right bottom. They are colored based on secondary structures.
Q86V59 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDP 100 Q5R6R8 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLAPLGPYRVLNKIFVREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDP 100 Q86V59 TQDAEFLKNLNEFLDAEGRTWEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAAEFEEMAAWALAAGRKVKKEP 200 Q5R6R8 TQDAEFLKNLNEFLDAEGRTWEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAAEFEEMAAWALAAGKKVKKEP 200 Q86V59 GLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSRSRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE 300 Q5R6R8 GLAAEVGSALKAETPNNWNATEDQHDPPKPLVRRAGAKSRSRRKKQKKNPKQEAVPWKKPKGINSSSTANLEDPEVGDAESMAISEPIKGSRKPCVKQEE 300 Q86V59 LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAPMRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREAS 400 Q5R6R8 LALKKPMAKCAWKGPREPPQDAQAEAESPGGASESDQDGGHESPPKKKAMAWVSAKNPAPMRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREAS 400 Q86V59 DQKAPRGQQPAEATASTSRGPKAKPEGSPRRATNESRKV 439 Q5R6R8 VQKAPQGQQPAEATASTSRGPRAKPEGSPRRATNESRKV 439
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
1. PB | GO:0005730 | nucleolus |
1. PB | GO:0005654 | nucleoplasm |
2. P | GO:0006370 | 7-methylguanosine mRNA capping |
2. P | GO:0042273 | ribosomal large subunit biogenesis |
2. P | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
2. P | GO:0009414 | response to water deprivation |
2. P | GO:0000407 | phagophore assembly site |
2. P | GO:0051028 | mRNA transport |
2. P | GO:1990316 | Atg1/ULK1 kinase complex |
2. P | GO:0035145 | exon-exon junction complex |
2. P | GO:0005634 | nucleus |
2. P | GO:0000340 | RNA 7-methylguanosine cap binding |
2. P | GO:0048571 | long-day photoperiodism |
2. P | GO:0042162 | telomeric DNA binding |
2. P | GO:0016607 | nuclear speck |
2. P | GO:0003723 | RNA binding |
2. P | GO:0031588 | nucleotide-activated protein kinase complex |
2. P | GO:0000339 | RNA cap binding |
2. P | GO:0070478 | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay |
2. P | GO:0000463 | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
2. P | GO:0000750 | pheromone-dependent signal transduction involved in conjugation with cellular fusion |
2. P | GO:0009863 | salicylic acid mediated signaling pathway |
2. P | GO:0017056 | structural constituent of nuclear pore |
2. P | GO:0045727 | positive regulation of translation |
2. P | GO:0000045 | autophagosome assembly |
2. P | GO:0003729 | mRNA binding |
2. P | GO:0034451 | centriolar satellite |
2. P | GO:0048026 | positive regulation of mRNA splicing, via spliceosome |
2. P | GO:0009867 | jasmonic acid mediated signaling pathway |
2. P | GO:0031490 | chromatin DNA binding |
2. P | GO:0080090 | regulation of primary metabolic process |
3. B | GO:0090200 | positive regulation of release of cytochrome c from mitochondria |
3. B | GO:0005813 | centrosome |
3. B | GO:0007088 | regulation of mitotic nuclear division |
3. B | GO:0005829 | cytosol |
3. B | GO:0097190 | apoptotic signaling pathway |
3. B | GO:0097192 | extrinsic apoptotic signaling pathway in absence of ligand |
3. B | GO:0002437 | inflammatory response to antigenic stimulus |
3. B | GO:0000226 | microtubule cytoskeleton organization |
3. B | GO:0031625 | ubiquitin protein ligase binding |
3. B | GO:0008625 | extrinsic apoptotic signaling pathway via death domain receptors |
3. B | GO:0005741 | mitochondrial outer membrane |
3. B | GO:1990393 | 3M complex |
3. B | GO:0042981 | regulation of apoptotic process |
3. B | GO:0001844 | protein insertion into mitochondrial membrane involved in apoptotic signaling pathway |
3. B | GO:0008630 | intrinsic apoptotic signaling pathway in response to DNA damage |
3. B | GO:0043065 | positive regulation of apoptotic process |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q86V59 | Paraneoplastic antigen-like protein 8A | 0 | 5.66e-148 | 0.0 |
1. PB | A7E321 | Paraneoplastic antigen-like protein 8A | 2.56e-07 | 3.74e-39 | 0.0 |
1. PB | Q5R6R8 | Paraneoplastic antigen-like protein 8A | 1.23e-11 | 2.95e-92 | 0.0 |
1. PB | Q80VM8 | Paraneoplastic antigen-like protein 8A | 3.22e-08 | 1.62e-43 | 8.70e-159 |
1. PB | Q9ULN7 | Paraneoplastic antigen-like protein 8B | 1.67e-01 | 4.23e-06 | 2.61e-28 |
2. P | Q8K2X2 | RNA-binding protein 48 | 1.73e-01 | 7.37e-04 | NA |
2. P | A2A3V1 | A-kinase anchor protein 17B | 1.08e-01 | 3.75e-02 | NA |
2. P | Q9BZI7 | Regulator of nonsense transcripts 3B | 1.67e-02 | 1.11e-06 | NA |
2. P | Q8BZR9 | Nuclear cap-binding protein subunit 3 | 2.86e-01 | 3.60e-03 | NA |
2. P | Q5RL73 | RNA-binding protein 48 | 7.58e-02 | 4.33e-06 | NA |
2. P | E7Q4T7 | Cruciform DNA-recognizing protein 1 | NA | 4.42e-02 | NA |
2. P | Q9VWD4 | Probable RNA-binding protein CG14230 | 1.19e-01 | 1.51e-02 | NA |
2. P | A6ZRR2 | Signal transduction protein MDG1 | 1.64e-01 | 1.68e-03 | NA |
2. P | Q8RWN5 | Glycine-rich RNA-binding protein RZ1C | 1.74e-01 | 4.80e-02 | NA |
2. P | A2QWA6 | Autophagy-related protein 13 | 2.84e-01 | 1.98e-02 | NA |
2. P | Q9AST1 | Transcription initiation factor TFIID subunit 15 | 4.56e-02 | 5.17e-03 | NA |
2. P | Q5R4U2 | RNA-binding protein 48 | 2.43e-01 | 1.53e-04 | NA |
2. P | C8ZG55 | Signal transduction protein MDG1 | 4.46e-02 | 8.51e-04 | NA |
2. P | B0S733 | Regulator of nonsense transcripts 3A | 6.23e-02 | 1.86e-05 | NA |
2. P | B3LP25 | Signal transduction protein MDG1 | 2.57e-01 | 1.18e-03 | NA |
2. P | Q9FVW4 | Regulator of nonsense transcripts UPF3 | 1.59e-01 | 2.98e-15 | NA |
2. P | A4FVJ7 | RNA-binding protein 48 | 1.24e-01 | 4.93e-07 | NA |
2. P | Q5VYV7 | Protein SLX4IP | 2.11e-02 | 5.93e-03 | NA |
2. P | Q1E891 | Autophagy-related protein 13 | 3.20e-01 | 3.30e-02 | NA |
2. P | Q9H1J1 | Regulator of nonsense transcripts 3A | 1.42e-02 | 7.38e-05 | NA |
2. P | Q5ZM19 | Nuclear cap-binding protein subunit 3 | 5.92e-01 | 9.68e-03 | NA |
2. P | E7NIP0 | Cruciform DNA-recognizing protein 1 | 5.82e-02 | 4.71e-02 | NA |
2. P | Q9HFE6 | Uncharacterized RNA-binding protein P16F5.06 | 1.21e-02 | 1.28e-02 | NA |
2. P | P53885 | Signal transduction protein MDG1 | 2.07e-01 | 8.51e-04 | NA |
2. P | Q561R3 | RNA-binding protein 48 | 8.42e-02 | 3.92e-04 | NA |
2. P | A6QPE1 | RNA-binding protein 48 | 9.39e-02 | 2.00e-07 | NA |
2. P | Q10267 | Nonsense-mediated mRNA decay protein 3 | 8.63e-03 | 1.43e-06 | NA |
2. P | Q6DFQ2 | Nuclear cap-binding protein subunit 3 | 4.62e-01 | 1.19e-03 | NA |
2. P | Q08287 | 60S ribosome subunit biogenesis protein NOP8 | 3.50e-01 | 3.94e-03 | NA |
2. P | C7GTE8 | Signal transduction protein MDG1 | 3.33e-01 | 1.28e-03 | NA |
2. P | Q12044 | Regulator of calcineurin 2 | 3.23e-01 | 5.30e-04 | NA |
3. B | Q95KI4 | Modulator of apoptosis 1 | 1.15e-04 | NA | 2.74e-35 |
3. B | P62521 | Coiled-coil domain-containing protein 8 | 2.54e-01 | NA | 1.10e-09 |
3. B | Q8ND90 | Paraneoplastic antigen Ma1 | 1.68e-04 | NA | 3.59e-41 |
3. B | Q5DTT8 | Paraneoplastic antigen-like protein 5 | 5.28e-02 | NA | 3.08e-23 |
3. B | Q8VHZ4 | Paraneoplastic antigen Ma1 homolog | 8.32e-05 | NA | 2.75e-40 |
3. B | Q9UL42 | Paraneoplastic antigen Ma2 | 8.07e-05 | NA | 6.35e-35 |
3. B | Q9GMU3 | Paraneoplastic antigen Ma2 homolog | 4.44e-03 | NA | 5.45e-35 |
3. B | A0A0J9YX94 | Paraneoplastic antigen Ma6F | 3.19e-03 | NA | 2.51e-24 |
3. B | Q9H0W5 | Coiled-coil domain-containing protein 8 | 4.16e-02 | NA | 1.76e-10 |
3. B | A0A1B0GUJ8 | Paraneoplastic antigen-like protein 8C | 2.82e-05 | NA | 1.13e-33 |
3. B | Q9ERH6 | Modulator of apoptosis 1 | 1.90e-04 | NA | 1.01e-31 |
3. B | A6QLK5 | Paraneoplastic antigen Ma1 homolog | 1.74e-04 | NA | 4.15e-39 |
3. B | Q8BHK0 | Paraneoplastic antigen Ma2 homolog | 1.23e-03 | NA | 6.72e-33 |
3. B | Q5R486 | Paraneoplastic antigen Ma2 homolog | 3.97e-05 | NA | 4.23e-35 |
3. B | Q96PV4 | Paraneoplastic antigen-like protein 5 | 1.70e-03 | NA | 5.57e-35 |
3. B | Q2KIT6 | Paraneoplastic antigen Ma2 homolog | 3.86e-05 | NA | 3.03e-34 |
3. B | A0A0J9YXQ4 | Paraneoplastic antigen Ma6E | 8.60e-03 | NA | 6.75e-23 |
3. B | Q96BY2 | Modulator of apoptosis 1 | 1.14e-04 | NA | 8.24e-35 |
3. B | Q9UL41 | Paraneoplastic antigen Ma3 | 2.41e-03 | NA | 1.31e-33 |
3. B | P0CW24 | Paraneoplastic antigen-like protein 6A | 3.29e-04 | NA | 1.92e-24 |
3. B | Q8C1C8 | Paraneoplastic antigen Ma1 homolog | 8.76e-05 | NA | 1.45e-39 |
3. B | D3YZV8 | Coiled-coil domain-containing protein 8 homolog | 1.35e-02 | NA | 1.19e-10 |
3. B | Q8JZW8 | Paraneoplastic antigen Ma3 homolog | 2.47e-03 | NA | 7.54e-35 |