Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
Q99966
(Cbp/p300-interacting transactivator 1) with a FATCAT P-Value: 0.0461 and RMSD of 3.40 angstrom. The sequence alignment identity is 21.6%.
Structural alignment shown in left. Query protein Q8IXQ3 colored as red in alignment, homolog Q99966 colored as blue.
Query protein Q8IXQ3 is also shown in right top, homolog Q99966 showed in right bottom. They are colored based on secondary structures.
Q8IXQ3 ----------------MAKRRAAEPVTFHVPWKRLLLCDFAEQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSG 84 Q99966 MPTTSRPALDVKGGTSPAKEDANQEMS-SVAYSNLAVKDRKAV----AI-LHYPGVA-----------------SNGTKA--SGAPT--SSSG---SPIG 70 Q8IXQ3 QEREDHGLETGDPPLPPPPV-L-PGPGEELPGARL-------PG-GGGDDG-AGRAGPPRGDWGVASRQHNEEFWQYNTFQYWRNPL----PPID---LA 166 Q99966 S-------PTTTPPTKPPSFNLHPAP-HLLASMHLQKLNSQYQGMAAATPGQPGEAGPLQ-NWDFGAQAGGAE--SLSPSAGAQSPAIIDSDPVDEEVLM 159 Q8IXQ3 D-IEDLSEDT---LTEATLQGRNEGAE--VDMES-- 194 Q99966 SLVVELGLDRANELPELWL-GQNE-FDFTADFPSSC 193
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
1. PB | GO:0045893 | positive regulation of transcription, DNA-templated |
2. P | GO:0001570 | vasculogenesis |
2. P | GO:0070670 | response to interleukin-4 |
2. P | GO:0009637 | response to blue light |
2. P | GO:0060711 | labyrinthine layer development |
2. P | GO:0007080 | mitotic metaphase plate congression |
2. P | GO:0070741 | response to interleukin-6 |
2. P | GO:0051591 | response to cAMP |
2. P | GO:0045892 | negative regulation of transcription, DNA-templated |
2. P | GO:1902462 | positive regulation of mesenchymal stem cell proliferation |
2. P | GO:0000578 | embryonic axis specification |
2. P | GO:0070669 | response to interleukin-2 |
2. P | GO:0045668 | negative regulation of osteoblast differentiation |
2. P | GO:0003713 | transcription coactivator activity |
2. P | GO:0061608 | nuclear import signal receptor activity |
2. P | GO:0051510 | regulation of unidimensional cell growth |
2. P | GO:0071559 | response to transforming growth factor beta |
2. P | GO:0007076 | mitotic chromosome condensation |
2. P | GO:0032868 | response to insulin |
2. P | GO:0034451 | centriolar satellite |
2. P | GO:0030991 | intraciliary transport particle A |
2. P | GO:0010218 | response to far red light |
2. P | GO:0051457 | maintenance of protein location in nucleus |
2. P | GO:0006302 | double-strand break repair |
2. P | GO:0050693 | LBD domain binding |
2. P | GO:0005634 | nucleus |
2. P | GO:0031536 | positive regulation of exit from mitosis |
2. P | GO:0060395 | SMAD protein signal transduction |
2. P | GO:0005929 | cilium |
2. P | GO:0001890 | placenta development |
2. P | GO:0071104 | response to interleukin-9 |
2. P | GO:0009987 | cellular process |
2. P | GO:0001558 | regulation of cell growth |
2. P | GO:0031048 | heterochromatin assembly by small RNA |
2. P | GO:0000785 | chromatin |
2. P | GO:0010018 | far-red light signaling pathway |
2. P | GO:0060712 | spongiotrophoblast layer development |
2. P | GO:0042803 | protein homodimerization activity |
2. P | GO:0070410 | co-SMAD binding |
2. P | GO:0042438 | melanin biosynthetic process |
2. P | GO:0071105 | response to interleukin-11 |
2. P | GO:0043473 | pigmentation |
2. P | GO:0030511 | positive regulation of transforming growth factor beta receptor signaling pathway |
2. P | GO:0003682 | chromatin binding |
2. P | GO:0043622 | cortical microtubule organization |
2. P | GO:0009639 | response to red or far red light |
2. P | GO:0009646 | response to absence of light |
2. P | GO:0070555 | response to interleukin-1 |
2. P | GO:0071922 | regulation of cohesin loading |
2. P | GO:0030318 | melanocyte differentiation |
2. P | GO:0004869 | cysteine-type endopeptidase inhibitor activity |
2. P | GO:0030178 | negative regulation of Wnt signaling pathway |
2. P | GO:0034341 | response to interferon-gamma |
2. P | GO:0060231 | mesenchymal to epithelial transition |
2. P | GO:1901000 | regulation of response to salt stress |
2. P | GO:0035721 | intraciliary retrograde transport |
2. P | GO:0001658 | branching involved in ureteric bud morphogenesis |
2. P | GO:0071107 | response to parathyroid hormone |
2. P | GO:0060271 | cilium assembly |
2. P | GO:2000816 | negative regulation of mitotic sister chromatid separation |
2. P | GO:0006915 | apoptotic process |
2. P | GO:0003340 | negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis |
2. P | GO:0045143 | homologous chromosome segregation |
2. P | GO:0015630 | microtubule cytoskeleton |
2. P | GO:0006913 | nucleocytoplasmic transport |
2. P | GO:0007064 | mitotic sister chromatid cohesion |
2. P | GO:0034097 | response to cytokine |
2. P | GO:0009640 | photomorphogenesis |
2. P | GO:0005856 | cytoskeleton |
2. P | GO:0043524 | negative regulation of neuron apoptotic process |
2. P | GO:0097542 | ciliary tip |
2. P | GO:0001656 | metanephros development |
2. P | GO:0010029 | regulation of seed germination |
2. P | GO:0010780 | meiotic DNA double-strand break formation involved in reciprocal meiotic recombination |
2. P | GO:0010114 | response to red light |
2. P | GO:0043627 | response to estrogen |
2. P | GO:0009416 | response to light stimulus |
3. B | GO:0005815 | microtubule organizing center |
3. B | GO:0051901 | positive regulation of mitochondrial depolarization |
3. B | GO:0097190 | apoptotic signaling pathway |
3. B | GO:0090200 | positive regulation of release of cytochrome c from mitochondria |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q66H24 | Uncharacterized protein C9orf40 homolog | 1.03e-04 | 7.31e-26 | 3.90e-52 |
1. PB | Q8VCE4 | Uncharacterized protein C9orf40 homolog | 7.52e-04 | 3.23e-22 | 5.49e-43 |
1. PB | Q8IXQ3 | Uncharacterized protein C9orf40 | 0 | 1.57e-138 | 1.26e-138 |
2. P | Q9LZW2 | Transcription repressor OFP1 | 1.25e-01 | 4.03e-02 | NA |
2. P | A8MR65 | Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE | 1.18e-01 | 9.58e-04 | NA |
2. P | Q3KQW6 | UPF0688 protein C1orf174 homolog | 4.04e-02 | 8.84e-04 | NA |
2. P | Q8S4Q6 | Protein FAR-RED ELONGATED HYPOCOTYL 1 | 2.60e-01 | 7.98e-06 | NA |
2. P | Q32PF7 | UPF0688 protein C1orf174 homolog | 6.87e-02 | 1.18e-03 | NA |
2. P | E2QSX5 | Intraflagellar transport protein 43 homolog | 1.41e-01 | 2.06e-02 | NA |
2. P | P87309 | Mei4-dependent protein 2 | 1.60e-01 | 4.10e-02 | NA |
2. P | Q96FF9 | Sororin | 1.90e-01 | 2.23e-02 | NA |
2. P | Q1L9C7 | UPF0688 protein C1orf174 homolog | 4.92e-02 | 1.74e-02 | NA |
2. P | Q2TBN9 | Intraflagellar transport protein 43 homolog | 2.60e-01 | 2.96e-03 | NA |
2. P | Q96FT9 | Intraflagellar transport protein 43 homolog | 1.08e-01 | 2.73e-02 | NA |
2. P | Q9D9U4 | Testis-expressed protein 22 | 1.66e-01 | 1.15e-02 | NA |
2. P | Q9CQJ7 | Securin | 1.15e-01 | 6.21e-03 | NA |
2. P | A0JM83 | UPF0688 protein C1orf174 homolog | 2.58e-02 | 2.98e-05 | NA |
2. P | Q5XG21 | Sororin-B | 1.06e-01 | 3.88e-03 | NA |
2. P | Q9DA69 | Intraflagellar transport protein 43 homolog | 2.32e-01 | 1.01e-02 | NA |
2. P | Q99966 | Cbp/p300-interacting transactivator 1 | 4.61e-02 | 1.88e-03 | NA |
2. P | E7F555 | Intraflagellar transport protein 43 homolog | 1.70e-01 | 3.36e-03 | NA |
2. P | Q9BDI3 | Cbp/p300-interacting transactivator 1 | 8.24e-02 | 2.78e-02 | NA |
2. P | B5G1P1 | Intraflagellar transport protein 43 homolog | 7.95e-02 | 5.22e-07 | NA |
3. B | A3KQS5 | Protein AF1q | 2.87e-01 | NA | 0.024 |