Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
Q9D498
(IQ domain-containing protein F3) with a FATCAT P-Value: 0.0174 and RMSD of 5.56 angstrom. The sequence alignment identity is 19.9%.
Structural alignment shown in left. Query protein Q8N0W5 colored as red in alignment, homolog Q9D498 colored as blue.
Query protein Q8N0W5 is also shown in right top, homolog Q9D498 showed in right bottom. They are colored based on secondary structures.
Q8N0W5 MAAPRQIPSHIVRLKPSCSTDSSFTRTPVPTVSLASRELPVSSWQ---VT----EPSSKNLWEQICKEYEAEQPPFPEGYKVKQEPVITVAPVEEMLFHG 93 Q9D498 -----------MEL----DQDKK-KETPEETENV--NEVQLEKQNQDEETEAEAEEADKAILER-SDSVKTECPPQAE--KQNQDEE-TEAEAEE----- 73 Q8N0W5 FSAEHYFPVSHFTMISRTPCPQDKSETINPKT-CSPKEYLETFIFPVLLPGMASLLHQAKKEKCFERKRTKFIACDFLTEWLYNQNPKRAGEPFTEFFSI 192 Q9D498 --ADK-------AIL-------ERSDSV--KTECPPQA--E---------------KQIQEEKC----ETQ--EAD-----------RSEG---TE---L 115 Q8N0W5 PFVEERLKQHPRPPIPLSLLLTEEEAALYIQSFWRACVVRCDPEIQELRQW--QKKLREAK------HIHQQVKIFWAKQEQKVKCKMEDDAVPAAKMKI 284 Q9D498 GKLHSQLDQ-----LPDNVML----AGVKIQAWWRGTLVRRTLLLAALNAWTIQCWWREAKARLQGRKLHEVMR-YRLRNLN-LK------SI--SKRKQ 196 Q8N0W5 P--SS-- 287 Q9D498 PNQSSFL 203
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0001669 | acrosomal vesicle |
2. P | GO:0016592 | mediator complex |
2. P | GO:0005516 | calmodulin binding |
2. P | GO:0045944 | positive regulation of transcription by RNA polymerase II |
2. P | GO:2000344 | positive regulation of acrosome reaction |
2. P | GO:0003712 | transcription coregulator activity |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q8N0W5 | IQ domain-containing protein K | 0 | 1.26e-138 | 0.0 |
2. P | Q9D498 | IQ domain-containing protein F3 | 1.74e-02 | 9.94e-03 | NA |
2. P | A0JLT2 | Mediator of RNA polymerase II transcription subunit 19 | 2.88e-01 | 2.53e-02 | NA |