Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 2. P was
P80103
(Light-harvesting protein B800/830/1020 alpha-2 chain) with a FATCAT P-Value: 0.00096 and RMSD of 0.55 angstrom. The sequence alignment identity is 13.1%.
Structural alignment shown in left. Query protein Q8N8P6 colored as red in alignment, homolog P80103 colored as blue.
Query protein Q8N8P6 is also shown in right top, homolog P80103 showed in right bottom. They are colored based on secondary structures.
Q8N8P6 MVDGRTRTIINDIFFTEPTPEMSSLPVRSHSSLSLNLVSLMVICRGIIKL--VIHFRMYCPPRLKAKHIEPTLRPVPLKELRISHWPNECI---RHS--A 93 P80103 ----------------------------------------------MWKLWKFVDFRMTA---V-GFHIFFALIAFAV------HF--ACISSERFNWLE 42 Q8N8P6 SVPMA---TGAN-GL--ETK-DETKRNAEKCACSVFL 123 P80103 GAPAAEYYMDENPGIWKRTSYDG-------------- 65
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0001070 | RNA-binding transcription regulator activity |
2. P | GO:0070863 | positive regulation of protein exit from endoplasmic reticulum |
2. P | GO:0097623 | potassium ion export across plasma membrane |
2. P | GO:0042314 | bacteriochlorophyll binding |
2. P | GO:0060050 | positive regulation of protein glycosylation |
2. P | GO:0044196 | host cell nucleolus |
2. P | GO:0090314 | positive regulation of protein targeting to membrane |
2. P | GO:0016324 | apical plasma membrane |
2. P | GO:0060047 | heart contraction |
2. P | GO:0004857 | enzyme inhibitor activity |
2. P | GO:0086091 | regulation of heart rate by cardiac conduction |
2. P | GO:0015721 | bile acid and bile salt transport |
2. P | GO:0019866 | organelle inner membrane |
2. P | GO:0098915 | membrane repolarization during ventricular cardiac muscle cell action potential |
2. P | GO:0019054 | modulation by virus of host cellular process |
2. P | GO:0045121 | membrane raft |
2. P | GO:0005216 | ion channel activity |
2. P | GO:0015125 | bile acid transmembrane transporter activity |
2. P | GO:0044385 | integral to membrane of host cell |
2. P | GO:0016021 | integral component of membrane |
2. P | GO:0020002 | host cell plasma membrane |
2. P | GO:0030077 | plasma membrane light-harvesting complex |
2. P | GO:0033363 | secretory granule organization |
2. P | GO:0039707 | pore formation by virus in membrane of host cell |
2. P | GO:0044178 | host cell Golgi membrane |
2. P | GO:0060307 | regulation of ventricular cardiac muscle cell membrane repolarization |
2. P | GO:1902260 | negative regulation of delayed rectifier potassium channel activity |
2. P | GO:0015459 | potassium channel regulator activity |
2. P | GO:0033644 | host cell membrane |
2. P | GO:0032782 | bile acid secretion |
2. P | GO:0005251 | delayed rectifier potassium channel activity |
2. P | GO:0086005 | ventricular cardiac muscle cell action potential |
2. P | GO:0031647 | regulation of protein stability |
2. P | GO:0044662 | disruption by virus of host cell membrane |
2. P | GO:0002070 | epithelial cell maturation |
2. P | GO:0021750 | vestibular nucleus development |
2. P | GO:0071702 | organic substance transport |
2. P | GO:0050434 | positive regulation of viral transcription |
2. P | GO:0046760 | viral budding from Golgi membrane |
2. P | GO:0086011 | membrane repolarization during action potential |
2. P | GO:0055036 | virion membrane |
2. P | GO:0051259 | protein complex oligomerization |
2. P | GO:0046740 | transport of virus in host, cell to cell |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q8N8P6 | Putative uncharacterized protein FLJ39060 | 0 | 1.12e-169 | 9.72e-88 |
2. P | P67908 | Glycoprotein NB | NA | 1.12e-04 | NA |
2. P | P16208 | Glycoprotein NB | NA | 2.59e-03 | NA |
2. P | Q87008 | Putative movement protein | NA | 1.78e-03 | NA |
2. P | Q3E735 | Uncharacterized membrane protein YOR034C-A | 7.13e-01 | 9.71e-03 | NA |
2. P | P67909 | Glycoprotein NB | NA | 1.12e-04 | NA |
2. P | P16206 | Glycoprotein NB | NA | 3.38e-05 | NA |
2. P | P36128 | Putative uncharacterized protein YKR033C | 7.38e-02 | 2.73e-02 | NA |
2. P | Q5K130 | Putative uncharacterized protein CLLU1-AS1 | 6.26e-02 | 2.11e-02 | NA |
2. P | O14090 | Uncharacterized protein C2F3.07c | 8.97e-02 | 2.12e-03 | NA |
2. P | O13586 | Putative uncharacterized protein YPR092W | 3.93e-02 | 7.99e-03 | NA |
2. P | P0C649 | Movement protein | NA | 2.13e-02 | NA |
2. P | P16192 | Glycoprotein NB | NA | 6.57e-04 | NA |
2. P | A0A1B0GVT2 | Small integral membrane protein 36 | 3.01e-02 | 2.65e-02 | NA |
2. P | P0C5Q7 | Putative uncharacterized protein YNR001W-A | 3.62e-01 | 3.48e-03 | NA |
2. P | F5HI25 | Protein ORF28 | NA | 3.82e-02 | NA |
2. P | P14992 | Movement protein | NA | 2.35e-02 | NA |
2. P | P0C648 | Movement protein | NA | 2.13e-02 | NA |
2. P | P53263 | Putative uncharacterized protein YGR107W | 3.78e-02 | 5.02e-03 | NA |
2. P | P16202 | Glycoprotein NB | NA | 1.92e-03 | NA |
2. P | O13541 | Putative uncharacterized protein YLR280C | 1.95e-01 | 1.49e-02 | NA |
2. P | P16204 | Glycoprotein NB | NA | 4.44e-06 | NA |
2. P | Q60409 | Potassium voltage-gated channel subfamily E member 1 | 1.17e-01 | 1.55e-03 | NA |
2. P | P16196 | Glycoprotein NB | NA | 3.34e-05 | NA |
2. P | Q80WK2 | Organic solute transporter subunit beta | 2.62e-02 | 7.06e-03 | NA |
2. P | P27908 | Glycoprotein NB | NA | 1.26e-02 | NA |
2. P | Q28705 | Potassium voltage-gated channel subfamily E member 1 | 7.67e-02 | 1.75e-03 | NA |
2. P | Q9WIJ7 | Putative movement protein | NA | 1.89e-02 | NA |
2. P | Q8NDY4 | Myelodysplastic syndrome 2 translocation-associated protein | 3.60e-01 | 1.91e-02 | NA |
2. P | Q9XSP1 | Potassium voltage-gated channel subfamily E member 1 | 1.15e-01 | 2.68e-02 | NA |
2. P | Q8TEF2 | Uncharacterized protein C10orf105 | 2.68e-02 | 1.53e-04 | NA |
2. P | F5HE74 | Protein UL148A | NA | 1.60e-04 | NA |
2. P | Q38040 | Lysis protein | NA | 3.67e-02 | NA |
2. P | O39830 | Putative movement protein | NA | 1.75e-02 | NA |
2. P | P80103 | Light-harvesting protein B800/830/1020 alpha-2 chain | 9.60e-04 | 5.87e-03 | NA |
2. P | P19741 | Envelope small membrane protein | NA | 5.69e-03 | NA |
2. P | P57180 | Uncharacterized protein BU078 | 1.58e-01 | 5.12e-03 | NA |
2. P | Q2NKV5 | Transmembrane and coiled-coil domain-containing protein 2 | 1.76e-02 | 4.97e-03 | NA |
2. P | P06817 | Glycoprotein NB | NA | 9.32e-03 | NA |
2. P | P05913 | Protein Tat | NA | 2.36e-04 | NA |
2. P | A4QNL6 | Small integral membrane protein 19 | 7.06e-02 | 5.93e-03 | NA |
2. P | F5HAK6 | Protein UL148B | NA | 1.53e-02 | NA |
2. P | Q0Q464 | Envelope small membrane protein | NA | 4.17e-04 | NA |