Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
Q5R796
(F-box only protein 36) with a FATCAT P-Value: 0.0 and RMSD of 0.51 angstrom. The sequence alignment identity is 98.9%.
Structural alignment shown in left. Query protein Q8NEA4 colored as red in alignment, homolog Q5R796 colored as blue.
Query protein Q8NEA4 is also shown in right top, homolog Q5R796 showed in right bottom. They are colored based on secondary structures.
Q8NEA4 MASWLPETLFETVGQGPPPSKDYYQLLVTRSQVIFRWWKISLRSEYRSTKPGEAKETHEDFLENSHLQGQTALIFGARILDYVINLCKGKFDFLERLSDD 100 Q5R796 MASWLPETLFETVGQGPPPSKDYYQLLVTRSQVIYRWWKISLRSEYRSTKPGEAKETHEDFLENSHLQGQTALIFGARILDYVINLCKGKFDFLERLSDD 100 Q8NEA4 LLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGWRQLFFTNKLQLQRQLRKRKQKYGNLREKQP 188 Q5R796 LLLNIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGWRQLFFTNKLQLQRQLRKRKQKYGNLREKQP 188
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0009751 | response to salicylic acid |
2. P | GO:0016567 | protein ubiquitination |
2. P | GO:0071456 | cellular response to hypoxia |
2. P | GO:0009961 | response to 1-aminocyclopropane-1-carboxylic acid |
2. P | GO:0009617 | response to bacterium |
2. P | GO:0009611 | response to wounding |
2. P | GO:0006970 | response to osmotic stress |
2. P | GO:0009753 | response to jasmonic acid |
2. P | GO:0009737 | response to abscisic acid |
2. P | GO:0009651 | response to salt stress |
3. B | GO:0004842 | ubiquitin-protein transferase activity |
3. B | GO:0006508 | proteolysis |
3. B | GO:0005829 | cytosol |
3. B | GO:0005654 | nucleoplasm |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q9CQ24 | F-box only protein 36 | 0.00e+00 | 1.21e-78 | 1.29e-106 |
1. PB | Q5R796 | F-box only protein 36 | 0.00e+00 | 4.44e-117 | 2.72e-138 |
1. PB | Q8NEA4 | F-box only protein 36 | 0 | 1.57e-142 | 1.73e-139 |
2. P | Q9FLX3 | F-box protein At5g52880 | 8.56e-03 | 7.72e-05 | NA |
2. P | Q9S9T6 | F-box protein At4g05010 | 1.11e-02 | 5.70e-03 | NA |
2. P | Q3E8K6 | Putative F-box protein At5g39470 | 1.45e-02 | 2.29e-12 | NA |
2. P | O65416 | F-box protein SKIP27 | 3.47e-02 | 3.80e-07 | NA |
2. P | Q5XF11 | F-box protein At4g35930 | 9.99e-02 | 7.53e-03 | NA |
2. P | Q8GX77 | F-box protein At1g61340 | 4.19e-02 | 3.92e-04 | NA |
3. B | Q9UK99 | F-box only protein 3 | 2.88e-02 | NA | 0.038 |
3. B | A6H7H7 | F-box only protein 3 | 2.43e-02 | NA | 0.037 |