Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
Q8BIG2
(Protein LKAAEAR1) with a FATCAT P-Value: 2.04e-07 and RMSD of 3.25 angstrom. The sequence alignment identity is 66.7%.
Structural alignment shown in left. Query protein Q8TD35 colored as red in alignment, homolog Q8BIG2 colored as blue.
Query protein Q8TD35 is also shown in right top, homolog Q8BIG2 showed in right bottom. They are colored based on secondary structures.
Q8TD35 MPPPAKEGGRKGPRER-----SGKSA---PGTAQGEERAKGAP-ATEPPKPGWALTPQGLAAMLPAQRHRHLLFGDLLEDVGAAASTFPCGSVE-PGYRM 90 Q8BIG2 MPTL----GVKGARERDKNSASGAGAGAGAGAGAGEKHRKG-PRTTDPPKTGWALTKQRLVALSPTLRQRHLLFGDFLDDIGKVASMFPRESVELP-YDM 94 Q8TD35 PDPRPWTQSLELPAERQNRLLGVLKAAEARGRVRALRLRYTRMRAEEIALLIQRQKSARAAIRLELFLPPQLKPARIPDPLDRQERRRVETILEENVDGT 190 Q8BIG2 PDPRTWSQALNLPSEHQNRFLGLIKAAEARGRVHTLRLRYTRMRAEEISLLIQKQSSARAAIRLELFLPPQLKPTKIPDPLDRHERRRVETILEEEVDGN 194 Q8TD35 IFPR 194 Q8BIG2 IFPR 198
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0039502 | suppression by virus of host type I interferon-mediated signaling pathway |
2. P | GO:0016592 | mediator complex |
2. P | GO:0039563 | suppression by virus of host JAK-STAT cascade via inhibition of STAT1 activity |
2. P | GO:0039564 | suppression by virus of host JAK-STAT cascade via inhibition of STAT2 activity |
2. P | GO:0050215 | propanediol dehydratase activity |
2. P | GO:0003712 | transcription coregulator activity |
2. P | GO:0031419 | cobalamin binding |
2. P | GO:0000785 | chromatin |
2. P | GO:0051144 | propanediol catabolic process |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q8TD35 | Protein LKAAEAR1 | 0 | 2.98e-141 | 1.72e-135 |
1. PB | Q8BIG2 | Protein LKAAEAR1 | 2.04e-07 | 6.62e-14 | 8.11e-82 |
2. P | P06165 | Protein C | NA | 1.48e-02 | NA |
2. P | Q05103 | Uncharacterized 15.5 kDa protein | NA | 3.18e-02 | NA |
2. P | P32534 | Protein C | NA | 4.46e-02 | NA |
2. P | P28055 | Protein C | NA | 4.21e-02 | NA |
2. P | O64201 | Gene 5 protein | NA | 3.14e-04 | NA |
2. P | Q914L9 | Uncharacterized protein 11 | NA | 3.01e-02 | NA |
2. P | O67369 | Uncharacterized protein aq_1356 | 2.81e-01 | 1.29e-02 | NA |
2. P | P52534 | Protein U84 | NA | 1.07e-04 | NA |
2. P | P06164 | Protein C | NA | 3.89e-04 | NA |
2. P | Q05267 | Gene 5 protein | NA | 9.42e-05 | NA |
2. P | O31042 | Propanediol dehydratase small subunit | 1.14e-01 | 1.25e-04 | NA |
2. P | Q96EN9 | Required for excision 1-B domain-containing protein | 8.07e-02 | 8.57e-03 | NA |
2. P | P32533 | Protein C | NA | 2.82e-02 | NA |
2. P | Q4PDA7 | Mediator of RNA polymerase II transcription subunit 10 | 3.92e-02 | 2.49e-02 | NA |