Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
Q5U1Y9
(Protein FAM216A) with a FATCAT P-Value: 4.01e-06 and RMSD of 3.29 angstrom. The sequence alignment identity is 58.9%.
Structural alignment shown in left. Query protein Q8WUB2 colored as red in alignment, homolog Q5U1Y9 colored as blue.
Query protein Q8WUB2 is also shown in right top, homolog Q5U1Y9 showed in right bottom. They are colored based on secondary structures.
Q8WUB2 MLGQLLPHTARGLGAAEMPGQGPGSDWTERSSSAEPPAVAGTEGGGGGSAGYSCYQNSKGS------DRIKDGYKVNSHIAKLQELWKTPQNQTIHLSKS 94 Q5U1Y9 -----------------MPSRCPG--------VAGPPALARTE-GSEGSAGQSYHQNSKGTGEQHKAERIKEGHRMSSHTAKLQELWRTTQIQTIHIPKS 74 Q8WUB2 MMEASFFKHPDLTTGQKRYLCSIAKIYNANYLKMLMKRQYMHVLQHSSQKPGVLTHHRSRLSSRYSQKQHYPCTTWRHQLEREDS-GSSDIAAASAPEML 193 Q5U1Y9 MTDASFLKHPELTSGQKRYLCSIAKICNSSYLRTLMKRQYMHLFHHGLQKPGVLTHHRSHISSRYSQKQHSPCTTWRHHLEREDSLG---IAAE-APEMI 170 Q8WUB2 IQHSLWRPVRNKEGIKTGYASKTRCKSLKIFRRPRKLFMQTVSSDDSESHMSEEKKEEDLLNNFMQSMSIEEQG-EHLMLT----------- 273 Q5U1Y9 I-HALWRPLRHKEGLKIGYASKTRCKSLKIFRRPGRLFLLPVSSKDYQPCMNDETKEEDLLNECMQSMSIQEQGSSHASLTVSCPTPSSAIP 261
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0006398 | mRNA 3'-end processing by stem-loop binding and cleavage |
2. P | GO:1990904 | ribonucleoprotein complex |
2. P | GO:0071207 | histone pre-mRNA stem-loop binding |
2. P | GO:0045600 | positive regulation of fat cell differentiation |
2. P | GO:0051028 | mRNA transport |
2. P | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity |
2. P | GO:0006623 | protein targeting to vacuole |
2. P | GO:0071208 | histone pre-mRNA DCP binding |
2. P | GO:0071204 | histone pre-mRNA 3'end processing complex |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q3SZW6 | Protein FAM216A | 3.88e-04 | 5.17e-16 | 3.71e-135 |
1. PB | Q8WUB2 | Protein FAM216A | 0 | 2.63e-140 | 0.0 |
1. PB | Q9DB54 | Protein FAM216A | 1.76e-03 | 1.56e-13 | 1.57e-112 |
1. PB | Q5U1Y9 | Protein FAM216A | 4.01e-06 | 2.03e-05 | 6.31e-111 |
2. P | P38839 | Putative cyclin-dependent kinase inhibitor SPL2 | 4.07e-02 | 1.16e-02 | NA |
2. P | Q5VYS4 | Mesenteric estrogen-dependent adipogenesis protein | 4.49e-01 | 1.79e-04 | NA |
2. P | Q14493 | Histone RNA hairpin-binding protein | 1.33e-01 | 3.00e-02 | NA |
2. P | Q14BA6 | Mesenteric estrogen-dependent adipogenesis protein | 3.91e-01 | 1.53e-03 | NA |
3. B | Q8N7L0 | Protein FAM216B | 1.18e-02 | NA | 7.55e-05 |
3. B | Q17QP0 | Protein FAM216B | 1.53e-02 | NA | 0.004 |