Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
Q9DBT3
(Coiled-coil domain-containing protein 97) with a FATCAT P-Value: 0.0 and RMSD of 1.64 angstrom. The sequence alignment identity is 82.5%.
Structural alignment shown in left. Query protein Q96F63 colored as red in alignment, homolog Q9DBT3 colored as blue.
Query protein Q96F63 is also shown in right top, homolog Q9DBT3 showed in right bottom. They are colored based on secondary structures.
Q96F63 MEAVATA--TAAKEPDK-GCIEPGPGHWGELSRTPVPSKPQDKVEAAEATPVALDSDTSG---AENAAVSAMLHAVAASRLPVCSQQQGEPDLTEHEKVA 94 Q9DBT3 MEAVAAAEVTERK-PDNDG-VEPRVVHWGELSQTPIPSGPQEK-ETAERTP---DIPNSGSSQAESPAVSAMLHAIAASHLPVCSQQQGEPDLTEPEKVA 94 Q96F63 ILAQLYHEKPLVFLERFRTGLREEHLACFGHVRGDHRADFYCAEVARQGTARPRTLRTRLRNRRYAALRELIQGGEYFSDEQMRFRAPLLYEQYIGQYLT 194 Q9DBT3 ILGQLYHKKPLVFLERFRTGLREEHLACFGHLRGDHRADFYCAEVARQGTARPRTLRTRLRNRRYAALRELIQGGEYFSDEQMRFRAPLLYEQYIGQYLT 194 Q96F63 QEELSARTPTHQPPKPGSPGRPACPLSNLLLQSYEERELQQRLLQQQEEEEACLEEEEEEEDSDEEDQRSGKDSEAWVPDSEERLILREEFTSRMHQRFL 294 Q9DBT3 QEELNARTAAPQAPRSGSPGTPAYPLSDLLFQSYQERELQQKLLQQQEEEEACF---EEEEDSDEEDQRSDKDSEAWVPDSEERLILREEFTSRMHQRFL 291 Q96F63 DGKDGDFDYSTVDDNPDFDNLDIVARDEEERYFDEEEPEDAPSPELDGD 343 Q9DBT3 DGKDGGFDYSTVDDNPDFDNLDIVARDEEDRYFDEEEPEDVSSAELGGD 340
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
2. P | GO:0042797 | tRNA transcription by RNA polymerase III |
2. P | GO:0036120 | cellular response to platelet-derived growth factor stimulus |
2. P | GO:0045132 | meiotic chromosome segregation |
2. P | GO:0006342 | |
2. P | GO:0003682 | chromatin binding |
2. P | GO:1990314 | cellular response to insulin-like growth factor stimulus |
2. P | GO:0045600 | positive regulation of fat cell differentiation |
2. P | GO:0031298 | replication fork protection complex |
2. P | GO:0006383 | transcription by RNA polymerase III |
2. P | GO:0006359 | regulation of transcription by RNA polymerase III |
2. P | GO:0008283 | cell population proliferation |
2. P | GO:0000470 | maturation of LSU-rRNA |
2. P | GO:0006281 | DNA repair |
2. P | GO:0006384 | transcription initiation from RNA polymerase III promoter |
2. P | GO:0005666 | RNA polymerase III complex |
2. P | GO:0009880 | embryonic pattern specification |
2. P | GO:0000076 | DNA replication checkpoint signaling |
2. P | GO:0000373 | Group II intron splicing |
2. P | GO:0030424 | axon |
2. P | GO:0035329 | hippo signaling |
2. P | GO:0048478 | replication fork protection |
2. P | GO:0043111 | replication fork arrest |
2. P | GO:0030317 | flagellated sperm motility |
2. P | GO:0045089 | positive regulation of innate immune response |
2. P | GO:0032728 | positive regulation of interferon-beta production |
2. P | GO:0070847 | core mediator complex |
2. P | GO:0051321 | meiotic cell cycle |
2. P | GO:0030426 | growth cone |
2. P | GO:0030425 | dendrite |
2. P | GO:0015031 | protein transport |
2. P | GO:0038203 | TORC2 signaling |
2. P | GO:0051123 | RNA polymerase II preinitiation complex assembly |
2. P | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity |
2. P | GO:0005634 | nucleus |
2. P | GO:0006975 | DNA damage induced protein phosphorylation |
2. P | GO:0006306 | DNA methylation |
2. P | GO:0000460 | maturation of 5.8S rRNA |
2. P | GO:0007064 | mitotic sister chromatid cohesion |
2. P | GO:0032502 | developmental process |
2. P | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane |
2. P | GO:0009791 | post-embryonic development |
2. P | GO:0043570 | maintenance of DNA repeat elements |
2. P | GO:0034087 | establishment of mitotic sister chromatid cohesion |
2. P | GO:0032869 | cellular response to insulin stimulus |
2. P | GO:0061053 | somite development |
2. P | GO:0016604 | nuclear body |
2. P | GO:0071902 | positive regulation of protein serine/threonine kinase activity |
2. P | GO:0042734 | presynaptic membrane |
2. P | GO:0043204 | perikaryon |
2. P | GO:0071364 | cellular response to epidermal growth factor stimulus |
2. P | GO:0060037 | pharyngeal system development |
2. P | GO:0045211 | postsynaptic membrane |
2. P | GO:0071480 | cellular response to gamma radiation |
2. P | GO:0000979 | RNA polymerase II core promoter sequence-specific DNA binding |
2. P | GO:0021552 | midbrain-hindbrain boundary structural organization |
2. P | GO:0051607 | defense response to virus |
2. P | GO:0005669 | transcription factor TFIID complex |
2. P | GO:0002244 | hematopoietic progenitor cell differentiation |
2. P | GO:0005654 | nucleoplasm |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q9DBT3 | Coiled-coil domain-containing protein 97 | 0.00e+00 | 6.21e-72 | 1.45e-166 |
1. PB | Q96F63 | Coiled-coil domain-containing protein 97 | 0 | 4.11e-142 | 0.0 |
2. P | Q59X26 | Chromosome segregation in meiosis protein 3 | 2.39e-01 | 3.33e-02 | NA |
2. P | Q6FLB8 | Mediator of RNA polymerase II transcription subunit 4 | 2.06e-02 | 3.28e-04 | NA |
2. P | Q8R0C0 | DNA-directed RNA polymerase III subunit RPC7-like | 1.66e-01 | 3.04e-03 | NA |
2. P | Q84N48 | CRS2-associated factor 2, chloroplastic | 7.00e-01 | 2.73e-02 | NA |
2. P | Q1JQE2 | Probable RNA polymerase II nuclear localization protein SLC7A6OS | 8.28e-01 | 3.30e-02 | NA |
2. P | P46936 | Transcriptional coactivator YAP1 | 4.18e-01 | 2.67e-02 | NA |
2. P | O15318 | DNA-directed RNA polymerase III subunit RPC7 | 6.07e-01 | 1.39e-03 | NA |
2. P | A1C8Y9 | Chromosome segregation in meiosis protein 3 | 4.08e-01 | 5.81e-03 | NA |
2. P | P17890 | DNA-directed RNA polymerase III subunit RPC7 | 4.39e-01 | 4.35e-05 | NA |
2. P | Q04659 | Chromosome segregation in meiosis protein 3 | 5.12e-02 | 4.95e-03 | NA |
2. P | Q9D3R9 | Transcription initiation factor TFIID subunit 7-like | 1.47e-01 | 5.10e-03 | NA |
2. P | O13951 | RNA polymerase II nuclear localization protein iwr1 | 4.78e-01 | 4.18e-02 | NA |
2. P | Q9D5V6 | Synapse-associated protein 1 | 6.03e-03 | 1.41e-02 | NA |
2. P | Q9VFE6 | RRP15-like protein | 1.08e-01 | 1.72e-02 | NA |
2. P | Q9BT43 | DNA-directed RNA polymerase III subunit RPC7-like | 5.01e-01 | 2.00e-03 | NA |
2. P | Q75DC6 | Chromosome segregation in meiosis protein 3 | 3.99e-02 | 2.38e-02 | NA |
2. P | Q8GYP3 | RNA-directed DNA methylation 4 | 3.62e-01 | 4.94e-06 | NA |
2. P | A5DDH8 | Chromosome segregation in meiosis protein 3 | 1.12e-01 | 6.32e-05 | NA |
2. P | Q6NXY9 | DNA-directed RNA polymerase III subunit RPC7 | 4.43e-01 | 1.22e-04 | NA |
2. P | Q8WZJ8 | DNA-directed RNA polymerase III subunit rpc31 | 5.78e-01 | 8.13e-06 | NA |
2. P | Q5U3I2 | Probable RNA polymerase II nuclear localization protein SLC7A6OS | 9.26e-01 | 6.04e-04 | NA |
2. P | Q28GL6 | Probable RNA polymerase II nuclear localization protein SLC7A6OS | 6.29e-01 | 1.70e-02 | NA |
2. P | Q96A49 | Synapse-associated protein 1 | 5.80e-03 | 4.06e-02 | NA |
2. P | Q924S9 | Protein ripply3 | 8.97e-01 | 2.97e-02 | NA |
2. P | Q296J6 | RRP15-like protein | 1.19e-01 | 4.46e-02 | NA |
2. P | Q1RMR0 | DNA-directed RNA polymerase III subunit RPC7-like | 3.97e-01 | 4.40e-05 | NA |