Summary
Structures and Sequence Alignment
The best structural homolog that predicted by 1. PB was
Q1RMS0
(Serine-rich coiled-coil domain-containing protein 1) with a FATCAT P-Value: 0.000163 and RMSD of 11.81 angstrom. The sequence alignment identity is 72.4%.
Structural alignment shown in left. Query protein Q9C0I3 colored as red in alignment, homolog Q1RMS0 colored as blue.
Query protein Q9C0I3 is also shown in right top, homolog Q1RMS0 showed in right bottom. They are colored based on secondary structures.
Q9C0I3 MGDSGSRRSTLVSRLPIFRRSINRRHDSLPSSPSSSNTVGVHSSSPSSTNSSSGSTGKRRSIFRTPSISFHHKKGSEPKQEPTNQNLSISNGAQPGHSNM 100 Q1RMS0 MGDSGSRRSTLVSRLPIFRRSISRKHDSLPSSPSSSNTVGVHSSSPSSTNSSSGSTGKRRSLFRTPSISFHHKKGSEPKQEPTNQNLSISNGAQPGQSSM 100 Q9C0I3 QKLSLEEHIKTRGRHSVGFSSSRNKKITRSLTEDFEREKEHSTNKNVFINCLSSGKSEGDDSGFTEDQTRRSVKQSTRKLLPKSFSSHYKFSKPVLQSQS 200 Q1RMS0 QKLSLEEHTKARGRHSVGFSSSRNKKITRSLTEDFEREKEHSTNKNVFINCLSSGKSEGDDSGFTEEQTRRSVKQSTKKLLTKSFSSHYKLSKPVPQSQS 200 Q9C0I3 ISLVQQSEFSLEVTQYQEREPVLVRASPSCSVDVTERAGSSLQSPLLSADLTTAQTPSEFLALTEDSVSEMDAFSKSGSMASHCDNFGHNDSTSQMSLNS 300 Q1RMS0 ISLVQQSEFSLEITQYQEREPVLVRGSPSCSVDVTERAGSSLQSPLLSADLTTAQTPSEFLALTEDSVSETDAFPKSGSMASHCDNLGHNDSTSQISPNP 300 Q9C0I3 AAVTKTTTELTGTVPCAIMSPGKYRLEGQCSTESNSLPETSAANQKEVLLQIAELPATSVSHSESNLPA-DSEREENIGLQNGETMLGTNSPRKLGFYEQ 399 Q1RMS0 AAVTKTTRDLRGTVPCAIVSPGKYRLEGRCSTESNSLPETSAAYQKEVLLQITKLPVMNGSDSETH-PSTDT-REDHIVIQNGETMLATSSPRKFGFYEH 398 Q9C0I3 HKAIAEHVKGIHPISDSKIIPTSGDHHIFNKTSHGYEANPAKVLASSLSPFREGRFIERRLRSSSEGTAGSSRMILKPKDGNIEEVNSLRKQRAGSSSSK 499 Q1RMS0 HKAIAERVKGIHPISDSRIIPSSGDHHVLNKTSYGYDANPAKVLASSLSPYREGRFIERRLRSSSEGTAGSSRMILKPKDGNVEEVNSLRKQRASSSSSK 498 Q9C0I3 MNSLDVLNNLGSCELDEDDLMLDLEFLEEQSLHPSVCREDSYHSVVSCAAVVLTPMEPMIEMKKREEPEFPEPSKQNLSLKLTKDVDQEARCSHISRMPN 599 Q1RMS0 MNSMDVLNNLGSCELDEDDLMLDLEFLEEQNLHPSVCREDSYHSVVSCAAVVLTPMEPTVEMKKREELKFREPSKQNLSLKLAKDIDQEARCSHIRGVPS 598 Q9C0I3 SPSADWPLQGVEENGGIDSLPFRLMLQDCTAVKTLLLKMKRVLQESADMSPASSTTSLPVSPLTEEPVPFKDIMKDECSMLKLQLKEKDELISQLQEELG 699 Q1RMS0 SPSSDWPLPSVEENGGIDSLPFRLMLQDCTAVKTLLLKMKRVLQESADMSPASSTTSLPVSPLAEEPLPFKDIMKDECSMLKLQLKEKDELISQLQEELE 698 Q9C0I3 KVRHLQKAFASRVDKSTQTELLCYDGL-NLKRLET-VQGGREATYRNRIVSQNLSTRDRKAIHTPTEDRFRYSAADQTSPYKNKTCQLPSLCLSNFLKDK 797 Q1RMS0 KVQHLQKAFASRVDKSTQTELLGYDALWN----PTCTEG----LFKP--V-HNIST-------------------------------------------- 743 Q9C0I3 ELAEVIKHSRGTYETLTSDVTQNLRATVGQSSLKPTAKTEGLSTFLEKPKDQVATARQHSTFTGRFGQPPRGPISLHMYSRKNVFLHHNLHSTELQTLGQ 897 Q1RMS0 ---------------------------------------------------------------------------------------------------- 743 Q9C0I3 QDG 900 Q1RMS0 --- 743
Go Annotations
1. PB indicates the go terms that are found by both PROST and BLAST.2. P indicates the go terms that are found by only PROST.
3. B indicates the go terms that are only annotated by BLAST.
Source | GO | Description |
---|---|---|
1. PB | GO:0008017 | microtubule binding |
1. PB | GO:0001578 | microtubule bundle formation |
1. PB | GO:0015630 | microtubule cytoskeleton |
2. P | GO:0051010 | microtubule plus-end binding |
2. P | GO:0007015 | actin filament organization |
2. P | GO:0000082 | G1/S transition of mitotic cell cycle |
2. P | GO:0016055 | Wnt signaling pathway |
2. P | GO:0032886 | regulation of microtubule-based process |
2. P | GO:0019904 | protein domain specific binding |
2. P | GO:0070449 | elongin complex |
2. P | GO:0030374 | nuclear receptor coactivator activity |
2. P | GO:0007398 | ectoderm development |
2. P | GO:0046965 | retinoid X receptor binding |
2. P | GO:0043296 | apical junction complex |
2. P | GO:0005874 | microtubule |
2. P | GO:0002119 | nematode larval development |
2. P | GO:0008283 | cell population proliferation |
2. P | GO:0006368 | transcription elongation from RNA polymerase II promoter |
2. P | GO:0090734 | site of DNA damage |
2. P | GO:0030331 | estrogen receptor binding |
2. P | GO:0090090 | negative regulation of canonical Wnt signaling pathway |
2. P | GO:0030056 | hemidesmosome |
2. P | GO:0042974 | retinoic acid receptor binding |
2. P | GO:0030275 | LRR domain binding |
2. P | GO:0023052 | signaling |
2. P | GO:0030425 | dendrite |
2. P | GO:0030496 | midbody |
2. P | GO:0031489 | myosin V binding |
2. P | GO:0030476 | ascospore wall assembly |
2. P | GO:0000226 | microtubule cytoskeleton organization |
2. P | GO:0007052 | mitotic spindle organization |
2. P | GO:0022008 | neurogenesis |
2. P | GO:0008023 | transcription elongation factor complex |
2. P | GO:0019888 | protein phosphatase regulator activity |
2. P | GO:0042975 | peroxisome proliferator activated receptor binding |
2. P | GO:0000306 | extrinsic component of vacuolar membrane |
2. P | GO:0008157 | protein phosphatase 1 binding |
2. P | GO:0035259 | glucocorticoid receptor binding |
2. P | GO:0016922 | nuclear receptor binding |
2. P | GO:0001558 | regulation of cell growth |
2. P | GO:0022027 | interkinetic nuclear migration |
2. P | GO:0046966 | thyroid hormone receptor binding |
2. P | GO:0098978 | glutamatergic synapse |
2. P | GO:0031594 | neuromuscular junction |
2. P | GO:0007281 | germ cell development |
2. P | GO:0043473 | pigmentation |
2. P | GO:0051015 | actin filament binding |
2. P | GO:0005815 | microtubule organizing center |
2. P | GO:0005628 | prospore membrane |
2. P | GO:0030318 | melanocyte differentiation |
2. P | GO:0060090 | molecular adaptor activity |
2. P | GO:0016324 | apical plasma membrane |
2. P | GO:0030178 | negative regulation of Wnt signaling pathway |
2. P | GO:0098962 | regulation of postsynaptic neurotransmitter receptor activity |
2. P | GO:0016461 | unconventional myosin complex |
2. P | GO:0098981 | cholinergic synapse |
2. P | GO:0009950 | dorsal/ventral axis specification |
2. P | GO:0001725 | stress fiber |
2. P | GO:0043025 | neuronal cell body |
2. P | GO:0021987 | cerebral cortex development |
2. P | GO:0000902 | cell morphogenesis |
2. P | GO:0031929 | TOR signaling |
2. P | GO:0048578 | positive regulation of long-day photoperiodism, flowering |
2. P | GO:0051017 | actin filament bundle assembly |
2. P | GO:0031505 | fungal-type cell wall organization |
2. P | GO:0031931 | TORC1 complex |
2. P | GO:0045202 | synapse |
2. P | GO:0048576 | positive regulation of short-day photoperiodism, flowering |
2. P | GO:0017022 | myosin binding |
2. P | GO:0045159 | myosin II binding |
2. P | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding |
2. P | GO:0030864 | cortical actin cytoskeleton |
2. P | GO:0043666 | regulation of phosphoprotein phosphatase activity |
2. P | GO:0000164 | protein phosphatase type 1 complex |
2. P | GO:0005912 | adherens junction |
2. P | GO:0060828 | regulation of canonical Wnt signaling pathway |
2. P | GO:0008013 | beta-catenin binding |
2. P | GO:0099572 | postsynaptic specialization |
2. P | GO:0032400 | melanosome localization |
Homologs
1. PB indicates the homologs that are found by both PROST and BLAST.
2. P indicates homologs that are only found by PROST.
3. B indicates homologs that are only found by BLAST.
Source | Homolog | Description | FATCAT p-val | PROST Evalue | BLAST Evalue |
---|---|---|---|---|---|
1. PB | Q3UHI0 | Serine-rich coiled-coil domain-containing protein 2 | 1.79e-01 | 3.41e-08 | 2.09e-04 |
1. PB | Q9H7U1 | Serine-rich coiled-coil domain-containing protein 2 | 2.20e-02 | 9.54e-10 | 1.48e-06 |
1. PB | Q1RMS0 | Serine-rich coiled-coil domain-containing protein 1 | 1.63e-04 | 6.18e-17 | 0.0 |
1. PB | Q8C0C4 | Serine-rich coiled-coil domain-containing protein 1 | 4.21e-04 | 4.16e-67 | 0.0 |
1. PB | Q9C0I3 | Serine-rich coiled-coil domain-containing protein 1 | 0 | 2.64e-151 | 0.0 |
2. P | Q9Y608 | Leucine-rich repeat flightless-interacting protein 2 | 3.37e-01 | 1.35e-03 | NA |
2. P | B1AZP2 | Disks large-associated protein 4 | 1.98e-01 | 1.80e-03 | NA |
2. P | P97839 | Disks large-associated protein 4 | 2.52e-01 | 2.45e-03 | NA |
2. P | Q6GNW0 | Leucine-rich repeat flightless-interacting protein 2 | 2.73e-01 | 6.96e-04 | NA |
2. P | Q2M3G4 | Protein Shroom1 | 1.58e-01 | 3.43e-03 | NA |
2. P | Q6GQV1 | INSYN2B protein | 9.97e-02 | 6.49e-06 | NA |
2. P | Q5SX79 | Protein Shroom1 | 1.21e-01 | 4.52e-02 | NA |
2. P | G5EEK3 | Non-centrosomal microtubule array protein 1 | 9.07e-02 | 3.24e-03 | NA |
2. P | Q9Y2H0 | Disks large-associated protein 4 | 1.06e-01 | 2.11e-03 | NA |
2. P | Q03780 | Uncharacterized protein YDR239C | 4.29e-01 | 7.81e-03 | NA |
2. P | P38229 | GLC7-interacting protein 1 | 5.20e-01 | 2.88e-02 | NA |
2. P | Q8IYF1 | Elongin-A2 | 8.86e-02 | 3.66e-02 | NA |
2. P | Q9SNQ6 | Protein HEADING DATE 3B | 2.84e-01 | 3.13e-02 | NA |
2. P | F1RDM5 | APC membrane recruitment protein 1 | 1.97e-01 | 4.48e-07 | NA |
2. P | E1C2Q8 | APC membrane recruitment protein 2 | 1.05e-01 | 3.84e-02 | NA |
2. P | Q08921 | Target of rapamycin complex 1 subunit TCO89 | 1.23e-01 | 4.75e-03 | NA |
2. P | Q6Y685 | Transforming acidic coiled-coil-containing protein 1 | 1.96e-01 | 4.85e-03 | NA |
2. P | Q09560 | Uncharacterized protein F36G3.1 | 9.36e-02 | 1.20e-02 | NA |
2. P | Q63187 | Elongin-A | 2.32e-01 | 1.20e-02 | NA |
2. P | O75410 | Transforming acidic coiled-coil-containing protein 1 | 4.57e-02 | 2.22e-03 | NA |
2. P | Q75C80 | Protein FYV8 | 1.16e-01 | 4.65e-02 | NA |
2. P | Q91V27 | Melanophilin | 7.20e-01 | 3.25e-02 | NA |
2. P | P33306 | Protein BCK2 | 1.41e-01 | 2.38e-03 | NA |
2. P | O14273 | Meiotically up-regulated protein C8C9.04 | 3.85e-01 | 2.68e-02 | NA |