Summary
NP_001018029.1
Homolog: NP_985751.1.
Wiesman et al.[1]: AAR181W (A. gossypii
Statistics
Total Homologs: 17
Non significant structural homologs: 0
Total Synteny Homologs: 3
Found Synteny Homologs: 0
Synteny Status: Existing synteny homologs couldn't found
Structures and Sequence Alignment
The best structural homolog was
NP_985751.1
(NP_985751.1 AFR204Wp [Eremothecium gossypii ATCC 10895]) with a FATCAT [2] P-Value: 5.43e-14 and RMSD of 1.22 angstrom. The sequence alignment identity is 15.7%.
Structural alignment shown in left. Query protein NP_001018029.1 colored as red in alignment, homolog NP_985751.1 colored as blue.
Query protein NP_001018029.1 is also shown in right top, homolog NP_985751.1 showed in right bottom. They are colored based on secondary structures.
NP_001018029.1 -----------MRNELYQLWCVASAARGV-AKSSFVRANSAMC-EYV--RTSNVLSRW--TRDRQWEAAKALSQRVKKEYAAN 66 NP_985751.1 MDQTKRRHYSQLSQQL-QL-----LQKNLEATTQHVETMSVQCNEHLVNKLGKIQASWFIGGNRCFE-QELLGKR-------- 68
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_003673368.1 | XP_003673368.1 hypothetical protein NCAS_0A04230 [Naumovozyma castellii CBS 4309] | 2.18e-13 | 1.32 | 9.25e-15 | False | 16.46% |
| XP_501297.1 | XP_501297.1 YALI0C00715p [Yarrowia lipolytica CLIB122] | 3.90e-12 | 1.54 | 1.55e-09 | False | 27.50% |
| Kwal_1678 | Kwal_1678 | 7.56e-09 | 1.10 | 1.71e-09 | False | 8.70% |
| Kwal_16172 | Kwal_16172 | 2.82e-04 | 2.49 | 1.80e-08 | False | 23.75% |
| NP_594723.1 | NP_594723.1 Sim4 and Mal2-associated protein 6 [Schizosaccharomyces pombe] | 1.43e-11 | 1.39 | 6.13e-08 | False | 13.25% |
| Kwal_YGOB_YHR199C-A | Kwal_YGOB_YHR199C-A | 2.34e-06 | 1.85 | 9.70e-07 | False | 14.42% |
| XP_002999405.1 | XP_002999405.1 uncharacterized protein KLLA0_E12167g [Kluyveromyces lactis] | 2.74e-09 | 2.20 | 1.07e-06 | False | 24.69% |
| NP_593386.1 | NP_593386.1 uncharacterized protein SPAC1705.02 [Schizosaccharomyces pombe] | 1.30e-07 | 1.26 | 1.20e-06 | False | 10.58% |
| XP_002143018.1 | XP_002143018.1 YALI0B17303p [Yarrowia lipolytica CLIB122] | 1.70e-08 | 1.19 | 2.16e-06 | False | 20.00% |
| XP_002143089.1 | XP_002143089.1 YALI0E31280p [Yarrowia lipolytica CLIB122] | 2.87e-09 | 0.83 | 2.21e-05 | False | 9.52% |
| NP_985527.1 | NP_985527.1 AFL021Cp [Eremothecium gossypii ATCC 10895] | 5.16e-08 | 2.88 | 4.07e-05 | False | 20.65% |
| XP_455564.1 | XP_455564.1 uncharacterized protein KLLA0_F10637g [Kluyveromyces lactis] | 1.02e-08 | 2.46 | 5.29e-05 | False | 19.80% |
| NP_001342240.1 | NP_001342240.1 AAL088W-Ap [Eremothecium gossypii ATCC 10895] | 1.28e-03 | 1.25 | 1.38e-04 | False | 16.30% |
| NP_985751.1 | NP_985751.1 AFR204Wp [Eremothecium gossypii ATCC 10895] | 5.43e-14 | 1.22 | 2.21e-04 | False | 15.66% |
| XP_452950.1 | XP_452950.1 uncharacterized protein KLLA0_C16775g [Kluyveromyces lactis] | 5.11e-13 | 1.38 | 5.18e-04 | False | 25.81% |
| NP_984939.1 | NP_984939.1 AER079Cp [Eremothecium gossypii ATCC 10895] | 9.57e-10 | 1.76 | 6.36e-04 | False | 15.79% |
| NP_983971.1 | NP_983971.1 60S ribosomal protein L29 [Eremothecium gossypii ATCC 10895] | 2.57e-05 | 0.52 | 9.45e-04 | False | 24.32% |