Summary
NP_001032574.1
Homolog: NP_587674.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 4
Non significant structural homologs: 3
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_587674.1
(NP_587674.1 uncharacterized protein SPCP20C8.02c [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 1.14e-02 and RMSD of 2.33 angstrom. The sequence alignment identity is 20.2%.
Structural alignment shown in left. Query protein NP_001032574.1 colored as red in alignment, homolog NP_587674.1 colored as blue.
Query protein NP_001032574.1 is also shown in right top, homolog NP_587674.1 showed in right bottom. They are colored based on secondary structures.
NP_001032574.1 ---------MFLPIIFHTI-LTLLNFGKYYCLPIQEDD------DKSGKEIEQILDNNIESLGLLLNSMS-------------LSSNFTTGDPEL--DSL 69 NP_587674.1 MLLLFCICCVFIKLVLAEVNLTFVDYAK---LPPNYAELLANLIDQHGLMLFDTADVRIEAYNYLLNSITETNTDTDAYLCQLLTGQYTT-DCYIFGDSV 96 NP_001032574.1 FQ--DDLIPEL-YSVLDGF 85 NP_587674.1 YEGPENINPSTRY--ID-- 111
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_657834.1 | XP_657834.1 hypothetical protein AN0230.2 [Aspergillus nidulans FGSC A4] | 9.30e-01 | 1.23 | 4.06e-06 | False | 20.17% |
| XP_680535.1 | XP_680535.1 hypothetical protein AN7266.2 [Aspergillus nidulans FGSC A4] | 1.52e-01 | 2.74 | 1.17e-05 | False | 12.50% |
| XP_658857.1 | XP_658857.1 predicted protein [Aspergillus nidulans FGSC A4] | 8.05e-02 | 2.34 | 1.11e-04 | False | 14.46% |
| NP_587674.1 | NP_587674.1 uncharacterized protein SPCP20C8.02c [Schizosaccharomyces pombe] | 1.14e-02 | 2.33 | 1.61e-04 | False | 20.17% |