Summary
NP_001032577.1
Homolog: XP_002999360.1.
Wiesman et al.[1]: NCAS0A07920 (S. castellii
Statistics
Total Homologs: 4
Non significant structural homologs: 2
Total Synteny Homologs: 4
Found Synteny Homologs: 4
Synteny Status: Synteny homolog(s) found
Structures and Sequence Alignment
The best structural homolog was
XP_002999360.1
(XP_002999360.1 uncharacterized protein KLLA0_C14916g [Kluyveromyces lactis]) with a FATCAT [2] P-Value: 1.91e-02 and RMSD of 2.94 angstrom. The sequence alignment identity is 26.8%.
Structural alignment shown in left. Query protein NP_001032577.1 colored as red in alignment, homolog XP_002999360.1 colored as blue.
Query protein NP_001032577.1 is also shown in right top, homolog XP_002999360.1 showed in right bottom. They are colored based on secondary structures.
NP_001032577.1 MDSGKSDINKHAY-KETATPLPVDPPSYEETMKQDK--EEVEADETTSSAHRDSFMRPVYTHH-PH-----P-RSHKGY--PGAKTL-TYTSR---- 80 XP_002999360.1 MS--QDD-QKQ-YPDEKKSSLPEDPPTYTDVLKEDKALREEQAENCNQVGH----MS---TNHIPEAIVATPVRREQVIITPAQKKVYSYSANVDDI 86
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| Kwal_YGOB_YDR461C-A | Kwal_YGOB_YDR461C-A | 2.04e-02 | 2.28 | 1.06e-10 | True | 35.29% |
| NP_001342281.1 | NP_001342281.1 AFR463W-Ap [Eremothecium gossypii ATCC 10895] | 2.56e-01 | 2.09 | 2.91e-06 | True | 32.18% |
| XP_002999360.1 | XP_002999360.1 uncharacterized protein KLLA0_C14916g [Kluyveromyces lactis] | 1.91e-02 | 2.94 | 4.33e-04 | True | 26.80% |
| XP_003673731.1 | XP_003673731.1 hypothetical protein NCAS_0A07920 [Naumovozyma castellii CBS 4309] | 4.00e-01 | 3.27 | 8.81e-04 | True | 27.54% |