Summary
NP_001257669.1
Homolog: XP_003677969.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 18
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_003677969.1
(XP_003677969.1 hypothetical protein NCAS_0H03120 [Naumovozyma castellii CBS 4309]) with a FATCAT [2] P-Value: 7.00e-05 and RMSD of 1.08 angstrom. The sequence alignment identity is 17.9%.
Structural alignment shown in left. Query protein NP_001257669.1 colored as red in alignment, homolog XP_003677969.1 colored as blue.
Query protein NP_001257669.1 is also shown in right top, homolog XP_003677969.1 showed in right bottom. They are colored based on secondary structures.
NP_001257669.1 -------------------------MAITPD-KQKKEQQHQPQNGPLDYAHICKCIAMFFVVAGVVLMFFETGLD-PEQKEQIKRLHQLDGIPHA 68 XP_003677969.1 MKQTAVRTFQRQIPRFGQASLFHKTMGTTNSATQRKE---------L----IAGTLSVLAITAGYGL-YRQTG-DRSEIKEIYKKERNT------ 74
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_003676408.1 | XP_003676408.1 hypothetical protein NCAS_0D04660 [Naumovozyma castellii CBS 4309] | 5.77e-03 | 2.88 | 1.75e-12 | False | 19.75% |
| XP_003674422.1 | XP_003674422.1 hypothetical protein NCAS_0A14860 [Naumovozyma castellii CBS 4309] | 1.13e-04 | 1.10 | 9.73e-11 | False | 18.75% |
| XP_002143081.1 | XP_002143081.1 YALI0E23192p [Yarrowia lipolytica CLIB122] | 5.03e-04 | 1.56 | 2.35e-08 | False | 20.20% |
| NP_596182.1 | NP_596182.1 putative ubiquinol-cytochrome-c reductase complex subunit Qcr10 [Schizosaccharomyces pombe] | 1.05e-02 | 3.17 | 7.15e-08 | False | 24.18% |
| NP_983036.1 | NP_983036.1 ABR090Wp [Eremothecium gossypii ATCC 10895] | 2.12e-03 | 2.14 | 3.40e-07 | False | 20.79% |
| XP_664261.1 | XP_664261.1 hypothetical protein AN6657.2 [Aspergillus nidulans FGSC A4] | 3.12e-03 | 2.89 | 3.48e-07 | False | 17.31% |
| XP_003674924.1 | XP_003674924.1 hypothetical protein NCAS_0B04680 [Naumovozyma castellii CBS 4309] | 6.90e-04 | 3.32 | 1.39e-06 | False | 20.48% |
| XP_499774.1 | XP_499774.1 YALI0A05137p [Yarrowia lipolytica CLIB122] | 7.32e-03 | 2.27 | 3.99e-06 | False | 26.55% |
| XP_501521.2 | XP_501521.2 YALI0C06534p [Yarrowia lipolytica CLIB122] | 2.14e-04 | 3.08 | 7.02e-06 | False | 13.08% |
| NP_985479.1 | NP_985479.1 AFL069Cp [Eremothecium gossypii ATCC 10895] | 4.09e-04 | 2.35 | 8.78e-06 | False | 15.79% |
| XP_453255.1 | XP_453255.1 uncharacterized protein KLLA0_D04334g [Kluyveromyces lactis] | 9.43e-04 | 3.19 | 3.57e-05 | False | 22.22% |
| NP_986345.1 | NP_986345.1 AGL322Wp [Eremothecium gossypii ATCC 10895] | 3.08e-02 | 2.76 | 5.97e-05 | False | 20.99% |
| XP_003677969.1 | XP_003677969.1 hypothetical protein NCAS_0H03120 [Naumovozyma castellii CBS 4309] | 7.00e-05 | 1.08 | 1.70e-04 | False | 17.89% |
| NP_001343137.1 | NP_001343137.1 uncharacterized protein SPAC922.09 [Schizosaccharomyces pombe] | 5.86e-04 | 2.58 | 1.95e-04 | False | 22.09% |
| NP_001342234.1 | NP_001342234.1 AGL048Cp [Eremothecium gossypii ATCC 10895] | 1.40e-03 | 3.07 | 2.12e-04 | False | 20.00% |
| Kwal_2601 | Kwal_2601 | 9.09e-05 | 0.95 | 3.45e-04 | False | 18.63% |
| NP_001343011.1 | NP_001343011.1 uncharacterized protein SPAC8C9.19 [Schizosaccharomyces pombe] | 4.42e-03 | 2.68 | 4.27e-04 | False | 16.87% |
| XP_660579.1 | XP_660579.1 hypothetical protein AN2975.2 [Aspergillus nidulans FGSC A4] | 2.18e-03 | 3.01 | 8.49e-04 | False | 22.83% |