Summary
NP_001257678.1
Homolog: NP_001343058.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 2
Non significant structural homologs: 1
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_001343058.1
(NP_001343058.1 uncharacterized protein SPCC188.05 [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 1.93e-03 and RMSD of 3.36 angstrom. The sequence alignment identity is 23.8%.
Structural alignment shown in left. Query protein NP_001257678.1 colored as red in alignment, homolog NP_001343058.1 colored as blue.
Query protein NP_001257678.1 is also shown in right top, homolog NP_001343058.1 showed in right bottom. They are colored based on secondary structures.
NP_001257678.1 MFLFRR----K-DYRIEIQKKKVVKSFFQMVYYRALRQHFCQTKS---FK--HSSKRNVSMMVIGKHRAY--LKSLRH-HIKGFIITFLVSFSRNLHGKT 87 NP_001343058.1 M-LIERCVLIKPEY-----KKFLI--HVNFIY--SI-NRIVGNKSNRLFGGFYLAKALVPLKVIG---IYSRLAISRHKAIKPF------NFSLCL--KL 78 NP_001257678.1 LDVGSINATRISSPPDNFLNWVFSFYSCSE 117 NP_001343058.1 ID----SKTYF----D-FI----------- 88
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_001343058.1 | NP_001343058.1 uncharacterized protein SPCC188.05 [Schizosaccharomyces pombe] | 1.93e-03 | 3.36 | 2.40e-06 | False | 23.48% |
| NP_593227.1 | NP_593227.1 uncharacterized protein SPAC56F8.13 [Schizosaccharomyces pombe] | 6.14e-02 | 4.57 | 7.03e-05 | False | 23.48% |