Summary
NP_001257680.1
Homolog: NP_596490.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 1
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_596490.1
(NP_596490.1 uncharacterized protein SPBC887.16 [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 5.50e-04 and RMSD of 1.54 angstrom. The sequence alignment identity is 18.8%.
Structural alignment shown in left. Query protein NP_001257680.1 colored as red in alignment, homolog NP_596490.1 colored as blue.
Query protein NP_001257680.1 is also shown in right top, homolog NP_596490.1 showed in right bottom. They are colored based on secondary structures.
NP_001257680.1 MA------P-KAFFVCLPWVLPRHALI-VRQAG--NPYHFLAYTNPR-----APGKLQDSHCPVFFMGII---IITII-T------VTLAII----IIN- 70 NP_596490.1 MARTNLQYPYKVLW-C--------AQVKVVKTGLIN---FFAPSIQRQRERVCEGYLHET--PLLLMQVVEREAITLAKTEFKNSFSNLHFFFLFWLLNF 86 NP_001257680.1 IIF--LTLFDDG--M---C--FYCSLLTFSFVSFNFDHFDHFDL 105 NP_596490.1 ILFFRIHLYSCNFRMSIICEEYY--------------------- 109
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_596490.1 | NP_596490.1 uncharacterized protein SPBC887.16 [Schizosaccharomyces pombe] | 5.50e-04 | 1.54 | 2.20e-05 | False | 19.26% |