Summary
NP_001257684.1
Homolog: XP_451994.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 6
Non significant structural homologs: 3
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_451994.1
(XP_451994.1 uncharacterized protein KLLA0_B10428g [Kluyveromyces lactis]) with a FATCAT [2] P-Value: 6.44e-04 and RMSD of 2.38 angstrom. The sequence alignment identity is 14.6%.
Structural alignment shown in left. Query protein NP_001257684.1 colored as red in alignment, homolog XP_451994.1 colored as blue.
Query protein NP_001257684.1 is also shown in right top, homolog XP_451994.1 showed in right bottom. They are colored based on secondary structures.
NP_001257684.1 MGYVIM-TFSSARMSERRARIIYIW-MHLSAYKINFPFVQFPTFFSLFRLQKKAAILIKN-----PSPFFLFFLFPYRKNSTARTIHQINQAVALVLLCV 93 XP_451994.1 -----MCTLGLLKMRRPKGRLIH-WDQEAQPNQIQHKYG--PR--DVSHYQK--CVSIKRISRYYPGPF-------Y--DS------Q---------LCV 64 NP_001257684.1 SH-HLTYLP-SVPSL------------------------------------------------------------------------------------ 106 XP_451994.1 THFHLS-LSLSV-SLVHREKEKRGPKSIKLPGHNRPIDSESFLSMKLVSYHVIGLMHRRLWEKSPPGKNSVGKKVVILVEKKLRLWETRWTDYFSGVPS 161
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_002143108.1 | XP_002143108.1 YALI0F11616p [Yarrowia lipolytica CLIB122] | 5.80e-01 | 1.85 | 6.40e-06 | False | 20.00% |
| NP_001343104.1 | NP_001343104.1 uncharacterized protein SPAC110.05 [Schizosaccharomyces pombe] | 2.18e-03 | 1.98 | 9.86e-06 | False | 17.74% |
| XP_003678329.1 | XP_003678329.1 hypothetical protein NCAS_0I03190 [Naumovozyma castellii CBS 4309] | 4.86e-03 | 2.42 | 2.29e-04 | False | 21.39% |
| XP_451994.1 | XP_451994.1 uncharacterized protein KLLA0_B10428g [Kluyveromyces lactis] | 6.44e-04 | 2.38 | 3.58e-04 | False | 14.57% |
| NP_592904.1 | NP_592904.1 protein mug177 [Schizosaccharomyces pombe] | 9.22e-01 | 1.35 | 3.88e-04 | False | 21.88% |
| XP_002999382.1 | XP_002999382.1 uncharacterized protein KLLA0_D19949g [Kluyveromyces lactis] | 1.19e-01 | 2.09 | 4.91e-04 | False | 17.01% |