Summary
NP_001297596.1
Homolog: NP_596490.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 1
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_596490.1
(NP_596490.1 uncharacterized protein SPBC887.16 [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 2.56e-04 and RMSD of 1.53 angstrom. The sequence alignment identity is 21.4%.
Structural alignment shown in left. Query protein NP_001297596.1 colored as red in alignment, homolog NP_596490.1 colored as blue.
Query protein NP_001297596.1 is also shown in right top, homolog NP_596490.1 showed in right bottom. They are colored based on secondary structures.
NP_001297596.1 MLKYVVTDIGKMC---LYIWPYRV-WSWRRLFIFRVLNVVSIAIL-FETP--HRLALVPNVCL-YTHMAIPLSTCLFCLCLCICIKYD-IT--QTQANNQ 89 NP_596490.1 -----------MARTNLQ-YPYKVLWCAQ-------VKVVKTGLINFFAPSIQR--QRERVCEGYLH-ETPL------LLMQV-VEREAITLAKTEFKNS 71 NP_001297596.1 F--LASFFVLILTINDLDVTFVI----------------- 110 NP_596490.1 FSNLHFFFLFWL-LNFI-LFFRIHLYSCNFRMSIICEEYY 109
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_596490.1 | NP_596490.1 uncharacterized protein SPBC887.16 [Schizosaccharomyces pombe] | 2.56e-04 | 1.53 | 5.12e-04 | False | 21.43% |