Summary
NP_001335746.1
Homolog: XP_455666.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 3
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_455666.1
(XP_455666.1 uncharacterized protein KLLA0_F13024g [Kluyveromyces lactis]) with a FATCAT [2] P-Value: 2.05e-04 and RMSD of 2.02 angstrom. The sequence alignment identity is 20.0%.
Structural alignment shown in left. Query protein NP_001335746.1 colored as red in alignment, homolog XP_455666.1 colored as blue.
Query protein NP_001335746.1 is also shown in right top, homolog XP_455666.1 showed in right bottom. They are colored based on secondary structures.
NP_001335746.1 MNAYWF---HYRASIKKEAPNYKRTFLGR-----ARNAFL---------LILSEAYL-LFVFLSYLIRGKSLEKRVNDE---AKCSQRCVPL-----QLA 74 XP_455666.1 MS---FGGKKFRS--KRQQLAYEASLAGRYQKHMNKNPFLWFGLPFCSVIVLGSFWLSEFTAVRYQQKDQKVQEMKEDDLVKMKANQRQFDIKEEYYRL- 94 NP_001335746.1 NNLAFGDRH---KRSANFKKG-IANTHSSLICSKP 105 XP_455666.1 QGL--GEQDWEPKRIPRF-KGESENVW-------- 118
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_003676221.1 | XP_003676221.1 hypothetical protein NCAS_0D02790 [Naumovozyma castellii CBS 4309] | 2.17e-04 | 2.02 | 2.97e-06 | False | 20.71% |
| XP_455666.1 | XP_455666.1 uncharacterized protein KLLA0_F13024g [Kluyveromyces lactis] | 2.05e-04 | 2.02 | 9.43e-05 | False | 20.00% |
| XP_003676894.1 | XP_003676894.1 hypothetical protein NCAS_0F00540 [Naumovozyma castellii CBS 4309] | 2.14e-04 | 2.43 | 3.77e-04 | False | 10.91% |