Summary
NP_001335749.1
Homolog: XP_661010.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 1
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_661010.1
(XP_661010.1 predicted protein [Aspergillus nidulans FGSC A4]) with a FATCAT [2] P-Value: 3.19e-02 and RMSD of 2.58 angstrom. The sequence alignment identity is 19.3%.
Structural alignment shown in left. Query protein NP_001335749.1 colored as red in alignment, homolog XP_661010.1 colored as blue.
Query protein NP_001335749.1 is also shown in right top, homolog XP_661010.1 showed in right bottom. They are colored based on secondary structures.
NP_001335749.1 M-FIRVC------NRLIYTPTNVLLITVEDGRISVLLWFRYAIPAELCYTRLARILRGKHCADFPQSCCHNISRFGVLNKSVLGSFNQWLGGISKERK-L 92 XP_661010.1 MTALAIMAGPGNYNKLV----RLVLLNGVGGR-GV------A-NERLVAVRM-EAVRNSQSTDFGKDGAR--PREDRLDWKLVGGLT--LSGLIEYRSPL 83 NP_001335749.1 IARTFD-----AF-IRW-SSTRGEEVTTYFFLQKKSVTFSVARRLSG-RQQWEAQRKNNNNGKRNYLLSVTFV------------------- 157 XP_661010.1 SGKSHDSKRLQAFALELDSSAR--EIKT--RL-KLALTIGKASP-SGCKRRLE-EKKETSRARSLFFVKVFYIFLLWELWIRPNEPQDDTAS 168
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_661010.1 | XP_661010.1 predicted protein [Aspergillus nidulans FGSC A4] | 3.19e-02 | 2.58 | 4.92e-07 | False | 18.65% |