Summary
NP_001335755.1
Homolog: NP_588150.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 4
Non significant structural homologs: 1
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_588150.1
(NP_588150.1 uncharacterized protein SPCC338.18 [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 1.05e-04 and RMSD of 1.68 angstrom. The sequence alignment identity is 21.3%.
Structural alignment shown in left. Query protein NP_001335755.1 colored as red in alignment, homolog NP_588150.1 colored as blue.
Query protein NP_001335755.1 is also shown in right top, homolog NP_588150.1 showed in right bottom. They are colored based on secondary structures.
NP_001335755.1 --------------------------------MSKY-YILIELMNDKKNTNSSCDIFSFYLNFSDNPFSSFRLKSRLLYGIFSCFLLFYSLK--DLIGV- 64 NP_588150.1 MTEQNIDIKRELKDESPIGQSPHLENDGRPSLMSRYSYSSIEEV-SKEG----------YQWFKHQ--SVF-LKFSLIVLLFS---LMFSLTFGSLLGLI 83 NP_001335755.1 -----FK---QKYLYLSIL--LLWLLVLLFCLAKGLSHNLRADSFLQYPL 104 NP_588150.1 SLALGFPSVGYRYVLLPILNALLNRLRL---NSSGLK------------- 117
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_588150.1 | NP_588150.1 uncharacterized protein SPCC338.18 [Schizosaccharomyces pombe] | 1.05e-04 | 1.68 | 1.35e-06 | False | 22.22% |
| XP_452221.1 | XP_452221.1 uncharacterized protein KLLA0_C00616g [Kluyveromyces lactis] | 9.54e-01 | 4.27 | 2.66e-04 | False | 22.09% |
| XP_663072.1 | XP_663072.1 predicted protein [Aspergillus nidulans FGSC A4] | 3.86e-04 | 2.44 | 3.47e-04 | False | 21.05% |
| Kwal_15442 | Kwal_15442 | 3.78e-04 | 3.15 | 8.24e-04 | False | 24.78% |