Summary
NP_001335757.1
Homolog: NP_594890.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 1
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_594890.1
(NP_594890.1 protein mug106 [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 2.34e-02 and RMSD of 2.81 angstrom. The sequence alignment identity is 16.9%.
Structural alignment shown in left. Query protein NP_001335757.1 colored as red in alignment, homolog NP_594890.1 colored as blue.
Query protein NP_001335757.1 is also shown in right top, homolog NP_594890.1 showed in right bottom. They are colored based on secondary structures.
NP_001335757.1 MS---E----T----CSS---SLALL---HKILHIHSHTPSVYYNICISVRILTSERLQC---FFFS---FFP-----D----PNIT---GSGLKVPGFL 65 NP_594890.1 MSIKVEWIKFTRLKKCATLLVQLSLLRYRYMVL-AYNHK----FD-CI---VVT---IYCGCLFWFSNGALFTEGKARDRGRWAKATMKKNYGVKLKIFL 88 NP_001335757.1 F-----F--HTF------F--FSKSCCQALIDSFSSDYYQFKMLEKNRKAEKINKRTIFICSFTFEYKIKSCFSCFHLSTHTN 133 NP_594890.1 FTILLAFETNTFTPYTSTFSHFARGCL-------------------------------------------------------- 115
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_594890.1 | NP_594890.1 protein mug106 [Schizosaccharomyces pombe] | 2.34e-02 | 2.81 | 5.01e-04 | False | 17.49% |