Summary
NP_001335775.1
Homolog: NP_594890.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 1
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_594890.1
(NP_594890.1 protein mug106 [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 6.06e-04 and RMSD of 1.80 angstrom. The sequence alignment identity is 21.4%.
Structural alignment shown in left. Query protein NP_001335775.1 colored as red in alignment, homolog NP_594890.1 colored as blue.
Query protein NP_001335775.1 is also shown in right top, homolog NP_594890.1 showed in right bottom. They are colored based on secondary structures.
NP_001335775.1 MSIN------------ALLYVLSLALLIWTGSVVT-------LLLLLFF-CLFLLFFS---LHFFCFT----REHVHYTLPPKCHSLKFQFDSIPSSSLS 73 NP_594890.1 MSIKVEWIKFTRLKKCATL-LVQLSLLRYRYMVLAYNHKFDCIVVTIYCGCLF--WFSNGAL----FTEGKARDRGRWA---KA-TMKKNY-GV---KLK 85 NP_001335775.1 LSPFPFLFFPRLRAVAFASPTLSFFFPI------------ 101 NP_594890.1 I----FL-FTIL--LAFETNT---FTPYTSTFSHFARGCL 115
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_594890.1 | NP_594890.1 protein mug106 [Schizosaccharomyces pombe] | 6.06e-04 | 1.80 | 8.84e-05 | False | 21.43% |