Summary
NP_001335778.1
Homolog: Kwal_15862.
Wiesman et al.[1]:
Statistics
Total Homologs: 5
Non significant structural homologs: 2
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
Kwal_15862
(Kwal_15862) with a FATCAT [2] P-Value: 2.21e-03 and RMSD of 2.20 angstrom. The sequence alignment identity is 19.6%.
Structural alignment shown in left. Query protein NP_001335778.1 colored as red in alignment, homolog Kwal_15862 colored as blue.
Query protein NP_001335778.1 is also shown in right top, homolog Kwal_15862 showed in right bottom. They are colored based on secondary structures.
NP_001335778.1 MNVVAIIMASQETCSGRAPRETPEWRRPACLVASIL-VRALEFSWLFST---CL--LVAFDFARDCGLPPHSG------KTWSDGKGPAALSFGKTNTKE 88 Kwal_15862 ---------------------MPE-RSICC--AFLLSISCINFSRLKSTTRFSLKYLIQL-VAQSCSYFSSSNLQFFCMASW---------CFG---SSA 63 NP_001335778.1 ATTNFYNR-LDEKSGEEQ---AEKRKENSRSW--IIYLL-------------- 121 Kwal_15862 FTTDILSRHLKNPSRDSQHCFLEDRR-GGFDWSSIGFVLLNQPMTADCFKLDL 115
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_593401.1 | NP_593401.1 uncharacterized protein SPAC23H4.05c [Schizosaccharomyces pombe] | 7.35e-01 | 1.36 | 5.88e-07 | False | 20.14% |
| XP_661846.1 | XP_661846.1 predicted protein [Aspergillus nidulans FGSC A4] | 9.20e-01 | 5.45 | 5.32e-06 | False | 17.68% |
| Kwal_15862 | Kwal_15862 | 2.21e-03 | 2.20 | 5.84e-05 | False | 19.61% |
| XP_664269.1 | XP_664269.1 predicted protein [Aspergillus nidulans FGSC A4] | 3.60e-02 | 2.54 | 1.06e-04 | False | 19.31% |
| NP_983397.2 | NP_983397.2 ACL007Cp [Eremothecium gossypii ATCC 10895] | 9.73e-03 | 2.24 | 6.26e-04 | False | 23.53% |