Summary
NP_001335791.1
Homolog: XP_453602.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 3
Non significant structural homologs: 1
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_453602.1
(XP_453602.1 uncharacterized protein KLLA0_D12122g [Kluyveromyces lactis]) with a FATCAT [2] P-Value: 9.52e-04 and RMSD of 2.32 angstrom. The sequence alignment identity is 20.9%.
Structural alignment shown in left. Query protein NP_001335791.1 colored as red in alignment, homolog XP_453602.1 colored as blue.
Query protein NP_001335791.1 is also shown in right top, homolog XP_453602.1 showed in right bottom. They are colored based on secondary structures.
NP_001335791.1 ----------------MAYSSLCL-------------CLLFNPKGCSN--LHPFVV-------DN---EFP-PYHLSLVLIKQQRMLDRNRSWAYLAALW 58 XP_453602.1 MGNLAMSSDTRRSPTENGYSSKCLWSYHHAIRRIAESC-LF----CTDGALHGYILVCMVSGTEKLKVE-PGPDSIGRMIV----MIIR-----CVVQLG 85 NP_001335791.1 RHPWTVISKCCLVYIYIQRQLEFGYSYCFFDFL--LVILSETVVILYY 104 XP_453602.1 RY------GCCIIY----RQ----YVSSFFLFLFSLALTGCTTLI--- 116
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_452189.1 | XP_452189.1 uncharacterized protein KLLA0_B14773g [Kluyveromyces lactis] | 3.59e-01 | 2.45 | 1.19e-05 | False | 26.12% |
| XP_453602.1 | XP_453602.1 uncharacterized protein KLLA0_D12122g [Kluyveromyces lactis] | 9.52e-04 | 2.32 | 4.31e-05 | False | 20.95% |
| NP_983405.1 | NP_983405.1 ACR002Cp [Eremothecium gossypii ATCC 10895] | 6.88e-03 | 1.17 | 7.28e-04 | False | 13.23% |