Summary
NP_001335792.1
Homolog: NP_594782.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 1
Non significant structural homologs: 0
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_594782.1
(NP_594782.1 uncharacterized protein SPAPB8E5.08 [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 4.23e-03 and RMSD of 3.65 angstrom. The sequence alignment identity is 23.9%.
Structural alignment shown in left. Query protein NP_001335792.1 colored as red in alignment, homolog NP_594782.1 colored as blue.
Query protein NP_001335792.1 is also shown in right top, homolog NP_594782.1 showed in right bottom. They are colored based on secondary structures.
NP_001335792.1 MIVFDVSLMI--IIIFSFAFNMSQSNILMLYNSPHVLVGSDARNFFSCKKWHR---CFSGEVILEEKKS--QSALGSRSLTCTCPLISAVQLHLERSFFS 93 NP_594782.1 MRKLRCKQMIPKLLPFIFIY-LSVANKIMFY---CIL---NERAFKHYKTYRRITDC--PE--IKNKKSRRKNQRNSSSIGLSNPNKFSIYIYIYFFFYS 89 NP_001335792.1 -LA---FFAVILLYIPG 106 NP_594782.1 FLCSPYLFKYISLF--- 103
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_594782.1 | NP_594782.1 uncharacterized protein SPAPB8E5.08 [Schizosaccharomyces pombe] | 4.23e-03 | 3.65 | 5.40e-04 | False | 23.93% |