Summary
NP_001335794.1
Homolog: NP_594386.1.
Wiesman et al.[1]:
Statistics
Total Homologs: 2
Non significant structural homologs: 1
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
NP_594386.1
(NP_594386.1 uncharacterized protein SPAC2F3.07c [Schizosaccharomyces pombe]) with a FATCAT [2] P-Value: 1.76e-02 and RMSD of 2.30 angstrom. The sequence alignment identity is 14.6%.
Structural alignment shown in left. Query protein NP_001335794.1 colored as red in alignment, homolog NP_594386.1 colored as blue.
Query protein NP_001335794.1 is also shown in right top, homolog NP_594386.1 showed in right bottom. They are colored based on secondary structures.
NP_001335794.1 M----GNSKTNGFFTPEKYL--YGIIQGLPPTLRGLAFIFFFLVAFY------FF-----PAFWD-------LCGVLRGARGKGFPKRKS---DANSQHS 73 NP_594386.1 MLVRENNS--N-----DRSIIEY-VIKIL--LISGISRIIILILAMFESIRHIIFHNDTNPS--DARKFQMAIC-RLSSQKSR---KLKNPIESSTTSHK 84 NP_001335794.1 KQFWTHSDFPIWFLRVLIPTRASINSMKYPHTAALVR 110 NP_594386.1 KKGYVRKCYE--CLQIQVS------------------ 101
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| NP_594890.1 | NP_594890.1 protein mug106 [Schizosaccharomyces pombe] | 1.49e-01 | 3.83 | 1.30e-04 | False | 25.56% |
| NP_594386.1 | NP_594386.1 uncharacterized protein SPAC2F3.07c [Schizosaccharomyces pombe] | 1.76e-02 | 2.30 | 2.33e-04 | False | 14.60% |