Summary
NP_009747.3
Homolog: XP_002999417.1.
Wiesman et al.[1]: NCAS0B02110 (S. castellii; 1E-06)
Statistics
Total Homologs: 8
Non significant structural homologs: 0
Total Synteny Homologs: 4
Found Synteny Homologs: 4
Synteny Status: Synteny homolog(s) found
Structures and Sequence Alignment
The best structural homolog was
XP_002999417.1
(XP_002999417.1 uncharacterized protein KLLA0_E23739g [Kluyveromyces lactis]) with a FATCAT [2] P-Value: 3.05e-06 and RMSD of 1.69 angstrom. The sequence alignment identity is 25.9%.
Structural alignment shown in left. Query protein NP_009747.3 colored as red in alignment, homolog XP_002999417.1 colored as blue.
Query protein NP_009747.3 is also shown in right top, homolog XP_002999417.1 showed in right bottom. They are colored based on secondary structures.
NP_009747.3 MPSLRDLSLERDQELNQLRARINQLGKTGKEEANDFVGLNISNEPVYDTVIQTGQSSNATNSFVQETIQKTKQKESG-QPYIIPQK--NEHQRYIDKVCE 97
XP_002999417.1 MESVIE---ERKKRLLQLR---QQY--T--EEKQE-----------TDSL----------------TVNKEKKNIEGIQD--IPAEGVSSEER-LDR--- 57
NP_009747.3 TSDLKAKLAPIMEVLEKKTNEKIKGIIRKRVL----QEPDRDNDDSG 140
XP_002999417.1 --DL--------EELKKRTDHSIKLLLRERILKEAIEEPAVNNDES- 93
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_002143125.1 | XP_002143125.1 YALI0F31020p [Yarrowia lipolytica CLIB122] | 1.02e-02 | 2.67 | 4.98e-20 | False | 24.84% |
| XP_003674669.1 | XP_003674669.1 hypothetical protein NCAS_0B02110 [Naumovozyma castellii CBS 4309] | 3.69e-03 | 2.66 | 5.76e-15 | True | 26.38% |
| NP_588560.1 | NP_588560.1 protein Cwf18 [Schizosaccharomyces pombe] | 1.28e-03 | 2.65 | 1.61e-13 | False | 25.93% |
| NP_001342261.1 | NP_001342261.1 AEL256C-Ap [Eremothecium gossypii ATCC 10895] | 6.66e-04 | 3.36 | 3.09e-10 | True | 23.50% |
| Kwal_27.12107 | Kwal_27.12107 | 1.26e-03 | 3.14 | 1.24e-06 | True | 27.65% |
| XP_002999417.1 | XP_002999417.1 uncharacterized protein KLLA0_E23739g [Kluyveromyces lactis] | 3.05e-06 | 1.69 | 9.19e-06 | True | 25.85% |
| XP_003675185.1 | XP_003675185.1 hypothetical protein NCAS_0B07300 [Naumovozyma castellii CBS 4309] | 1.04e-02 | 2.62 | 1.34e-04 | False | 25.32% |
| XP_003677682.1 | XP_003677682.1 hypothetical protein NCAS_0H00210 [Naumovozyma castellii CBS 4309] | 4.89e-04 | 2.68 | 6.69e-04 | False | 19.77% |