Summary
NP_010040.1
Homolog: XP_453080.2.
Wiesman et al.[1]:
Statistics
Total Homologs: 5
Non significant structural homologs: 2
Total Synteny Homologs: 0
Found Synteny Homologs: 0
Synteny Status: No synteny homologs exists
Structures and Sequence Alignment
The best structural homolog was
XP_453080.2
(XP_453080.2 uncharacterized protein KLLA0_D00209g [Kluyveromyces lactis]) with a FATCAT [2] P-Value: 2.22e-02 and RMSD of 2.07 angstrom. The sequence alignment identity is 23.8%.
Structural alignment shown in left. Query protein NP_010040.1 colored as red in alignment, homolog XP_453080.2 colored as blue.
Query protein NP_010040.1 is also shown in right top, homolog XP_453080.2 showed in right bottom. They are colored based on secondary structures.
NP_010040.1 MNVTE--NALLFKCGSKGY---INQTYTPTEIYNCGVAEGKKTAKEKNPTYSIFYDTFL-----TGQP---AESPET------FTCGSH----GFTNASY 77 XP_453080.2 MSL-EVGGPTLF-C-TEQYVLPIDSSTTLGDAIRCGRSWGS-----RHPS-----DDWLPESMDISPPIYNASAPNTDLNSTHRTCGPYFILAGSSNITL 87 NP_010040.1 VASDFYACGFLQG-KGTETNAGIHNTRPSHSLAKFTILFMLVLYTIV 123 XP_453080.2 LQA--WQCGVLAGNRATSSSSNVVKT-P-HLL----YLMILIAYFV- 125
Homologs
| Homolog | Description | FATCAT p-val | FATCAT RMSD | PROST Evalue | Synteny | Sequence Identity |
|---|---|---|---|---|---|---|
| XP_451523.2 | XP_451523.2 uncharacterized protein KLLA0_A12001g [Kluyveromyces lactis] | 3.26e-02 | 3.11 | 1.15e-21 | False | 30.56% |
| XP_451539.1 | XP_451539.1 uncharacterized protein KLLA0_B00220g [Kluyveromyces lactis] | 2.44e-02 | 2.68 | 1.40e-14 | False | 23.81% |
| XP_453080.2 | XP_453080.2 uncharacterized protein KLLA0_D00209g [Kluyveromyces lactis] | 2.22e-02 | 2.07 | 1.40e-14 | False | 23.81% |
| NP_001343099.1 | NP_001343099.1 uncharacterized protein SPAC11D3.19 [Schizosaccharomyces pombe] | 4.96e-01 | 3.00 | 2.64e-05 | False | 23.08% |
| XP_455074.1 | XP_455074.1 uncharacterized protein KLLA0_E24905g [Kluyveromyces lactis] | 8.50e-01 | 3.39 | 9.45e-05 | False | 20.77% |